RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W RLI1Q03195 608 aaKnown RBP1.5□□□□□ -2.17
YCK3YER123W DPB4Q04603 196 aaKnown RBP1.5□□□□□ -2.17
YCK3YER123W ENT4Q07872 247 aa1.5□□□□□ -2.17
YCK3YER123W YDL009CQ12210 107 aa1.5□□□□□ -2.17
YCK3YER123W PEP5P12868 1029 aa1.49□□□□□ -2.17
YCK3YER123W PMR1P13586 950 aa1.49□□□□□ -2.17
YCK3YER123W SGV1P23293 657 aaKnown RBP1.49□□□□□ -2.17
YCK3YER123W PUT3P25502 979 aaPredicted RBP1.49□□□□□ -2.17
YCK3YER123W RER1P25560 188 aa1.49□□□□□ -2.17
YCK3YER123W PTH2P34222 208 aa1.49□□□□□ -2.17
YCK3YER123W MTR2P34232 184 aaKnown RBP1.49□□□□□ -2.17
YCK3YER123W YHR131CP38835 850 aa1.49□□□□□ -2.17
YCK3YER123W YER010CP40011 234 aa1.49□□□□□ -2.17
YCK3YER123W SHO1P40073 367 aa1.49□□□□□ -2.17
YCK3YER123W FMP10P40098 244 aa1.49□□□□□ -2.17
YCK3YER123W ALG8P40351 577 aa1.49□□□□□ -2.17
YCK3YER123W PTR3P43606 678 aa1.49□□□□□ -2.17
YCK3YER123W SNG1P46950 547 aa1.49□□□□□ -2.17
YCK3YER123W YGR127WP53275 312 aa1.49□□□□□ -2.17
YCK3YER123W MSO1P53604 210 aaKnown RBP1.49□□□□□ -2.17
YCK3YER123W WSC2P53832 503 aa1.49□□□□□ -2.17
YCK3YER123W GTR1Q00582 310 aa1.49□□□□□ -2.17
YCK3YER123W MHR1Q06630 226 aa1.49□□□□□ -2.17
YCK3YER123W SYO1Q07395 620 aa1.49□□□□□ -2.17
YCK3YER123W RIX7Q07844 837 aaKnown RBP1.49□□□□□ -2.17
YCK3YER123W HNT3Q08702 217 aa1.49□□□□□ -2.17
YCK3YER123W RIM15P43565 1770 aa1.48□□□□□ -2.17
YCK3YER123W TY4B-HP0C2J7 1802 aa1.48□□□□□ -2.17
YCK3YER123W TY4B-JP47024 1803 aa1.48□□□□□ -2.17
YCK3YER123W SUI2P20459 304 aaKnown RBP1.48□□□□□ -2.17
YCK3YER123W BOS1P25385 244 aa1.48□□□□□ -2.17
YCK3YER123W YCR022CP25620 114 aa1.48□□□□□ -2.17
YCK3YER123W CBF2P32504 956 aa1.48□□□□□ -2.17
YCK3YER123W FRE1P32791 686 aa1.48□□□□□ -2.17
YCK3YER123W SLC1P33333 303 aa1.48□□□□□ -2.17
YCK3YER123W YBL055CP34220 418 aaPredicted RBP1.48□□□□□ -2.17
YCK3YER123W YIL089WP40500 205 aa1.48□□□□□ -2.17
YCK3YER123W SCD6P45978 349 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17 RIP-Chip
YCK3YER123W FAR3P46671 204 aa1.48□□□□□ -2.17
YCK3YER123W YJR154WP47181 346 aa1.48□□□□□ -2.17
YCK3YER123W BUD32P53323 261 aa1.48□□□□□ -2.17
YCK3YER123W SNO4Q04902 237 aa1.48□□□□□ -2.17
YCK3YER123W BNA5Q05979 453 aa1.48□□□□□ -2.17
YCK3YER123W MRPL51Q06090 140 aaPredicted RBP1.48□□□□□ -2.17
YCK3YER123W HSP33Q08914 237 aaKnown RBP1.48□□□□□ -2.17
YCK3YER123W TCO89Q08921 799 aa1.48□□□□□ -2.17
YCK3YER123W HSP32Q08992 237 aa1.48□□□□□ -2.17
YCK3YER123W SPT15P13393 240 aaKnown RBP1.47□□□□□ -2.17
YCK3YER123W YCR007CP25354 239 aa1.47□□□□□ -2.17
YCK3YER123W PUP3P25451 205 aaKnown RBP1.47□□□□□ -2.17
YCK3YER123W FUN19P28003 413 aaPredicted RBP1.47□□□□□ -2.17
YCK3YER123W SYN8P31377 255 aa1.47□□□□□ -2.17
YCK3YER123W SPR1P32603 445 aa1.47□□□□□ -2.17
YCK3YER123W NUP133P36161 1157 aa1.47□□□□□ -2.17
YCK3YER123W KAP123P40069 1113 aaKnown RBP1.47□□□□□ -2.17
YCK3YER123W TIS11P47977 285 aa1.47□□□□□ -2.17
YCK3YER123W EFM6P53970 246 aa1.47□□□□□ -2.17
YCK3YER123W IVY1Q04934 453 aa1.47□□□□□ -2.17
YCK3YER123W VPS74Q06385 345 aa1.47□□□□□ -2.17
YCK3YER123W RRP12Q12754 1228 aaKnown RBP1.47□□□□□ -2.17
YCK3YER123W YER078W-AQ3E7A2 54 aa1.47□□□□□ -2.17
YCK3YER123W YOL087CQ99247 1116 aa1.47□□□□□ -2.17
YCK3YER123W KRE5P22023 1365 aa1.47□□□□□ -2.17
YCK3YER123W MHP1P43638 1398 aa1.47□□□□□ -2.17
YCK3YER123W CSF1Q12150 2958 aa1.47□□□□□ -2.17
YCK3YER123W LPD1P09624 499 aaKnown RBP1.47□□□□□ -2.17
YCK3YER123W IMG1P25626 169 aa1.47□□□□□ -2.17
YCK3YER123W DEG1P31115 442 aaKnown RBP1.47□□□□□ -2.17
YCK3YER123W MRS6P32864 603 aaKnown RBP1.47□□□□□ -2.17
YCK3YER123W YBL059WP34224 193 aa1.47□□□□□ -2.17
YCK3YER123W RPL32P38061 130 aaKnown RBP1.47□□□□□ -2.17
YCK3YER123W ICS2P38284 255 aa1.47□□□□□ -2.17
YCK3YER123W AXL2P38928 823 aa1.47□□□□□ -2.17
YCK3YER123W DSD1P53095 428 aa1.47□□□□□ -2.17
YCK3YER123W YGR021WP53212 290 aa1.47□□□□□ -2.17
YCK3YER123W YGR126WP53274 230 aa1.47□□□□□ -2.17
YCK3YER123W BTN2P53286 410 aa1.47□□□□□ -2.17
YCK3YER123W IRC15Q02733 499 aa1.47□□□□□ -2.17
YCK3YER123W SLD5Q03406 294 aa1.47□□□□□ -2.17
YCK3YER123W YDL057WQ07379 328 aa1.47□□□□□ -2.17
YCK3YER123W YOR387CQ08910 206 aa1.47□□□□□ -2.17
YCK3YER123W LSP1Q12230 341 aaKnown RBP1.47□□□□□ -2.17
YCK3YER123W CTF3Q12748 733 aa1.47□□□□□ -2.17
YCK3YER123W PSK1P31374 1356 aa1.46□□□□□ -2.18
YCK3YER123W STH1P32597 1359 aa1.46□□□□□ -2.18
YCK3YER123W NUP192P47054 1683 aa1.46□□□□□ -2.18
YCK3YER123W TOP1P04786 769 aa1.46□□□□□ -2.18
YCK3YER123W ARD1P07347 238 aaPredicted RBP1.46□□□□□ -2.18
YCK3YER123W CPR1P14832 162 aaKnown RBP1.46□□□□□ -2.18
YCK3YER123W EXO70P19658 623 aa1.46□□□□□ -2.18
YCK3YER123W KGD1P20967 1014 aaKnown RBP1.46□□□□□ -2.18
YCK3YER123W PRE8P23639 250 aa1.46□□□□□ -2.18
YCK3YER123W RNA14P25298 677 aaKnown RBP1.46□□□□□ -2.18
YCK3YER123W YME1P32795 747 aa1.46□□□□□ -2.18
YCK3YER123W PAD1P33751 242 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
YCK3YER123W RFS1P38234 210 aaKnown RBP1.46□□□□□ -2.18
YCK3YER123W YHR210CP38893 341 aa1.46□□□□□ -2.18
YCK3YER123W HAT2P39984 401 aa1.46□□□□□ -2.18
YCK3YER123W ELP2P42935 788 aa1.46□□□□□ -2.18
YCK3YER123W APT1P49435 187 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms