RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W SPE2P21182 396 aa1.34□□□□□ -2.19
MSN5YDR335W PEX1P24004 1043 aa1.34□□□□□ -2.19
MSN5YDR335W URK1P27515 501 aa1.34□□□□□ -2.19
MSN5YDR335W YIM1P28625 365 aa1.34□□□□□ -2.19
MSN5YDR335W HXT3P32466 567 aaKnown RBP1.34□□□□□ -2.19
MSN5YDR335W RAD23P32628 398 aaKnown RBP1.34□□□□□ -2.19
MSN5YDR335W TPO5P36029 618 aa1.34□□□□□ -2.19
MSN5YDR335W ELF1P36053 145 aa1.34□□□□□ -2.19
MSN5YDR335W MRPL4P36517 319 aa1.34□□□□□ -2.19
MSN5YDR335W SWC5P38326 303 aa1.34□□□□□ -2.19
MSN5YDR335W YHR112CP38716 378 aa1.34□□□□□ -2.19
MSN5YDR335W PIH1P38768 344 aa1.34□□□□□ -2.19
MSN5YDR335W AIM20P40451 204 aa1.34□□□□□ -2.19
MSN5YDR335W POP1P41812 875 aa1.34□□□□□ -2.19
MSN5YDR335W NMD5P46970 1048 aa1.34□□□□□ -2.19
MSN5YDR335W RPA34P47006 233 aaPredicted RBP1.34□□□□□ -2.19
MSN5YDR335W AIM22P47051 409 aa1.34□□□□□ -2.19
MSN5YDR335W GTO1P48239 356 aa1.34□□□□□ -2.19
MSN5YDR335W RPN14P53196 417 aa1.34□□□□□ -2.19
MSN5YDR335W YNL143CP53908 130 aa1.34□□□□□ -2.19
MSN5YDR335W PET117Q02771 107 aa1.34□□□□□ -2.19
MSN5YDR335W FDC1Q03034 503 aa1.34□□□□□ -2.19
MSN5YDR335W PDR8Q06149 701 aa1.34□□□□□ -2.19
MSN5YDR335W PEX27Q08580 376 aa1.34□□□□□ -2.19
MSN5YDR335W ERP3Q12403 225 aa1.34□□□□□ -2.19
MSN5YDR335W YER175W-AQ8TGU4 54 aa1.34□□□□□ -2.19
MSN5YDR335W SOD2P00447 233 aa1.34□□□□□ -2.2
MSN5YDR335W RPL19AP0CX82 189 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W RPL19BP0CX83 189 aaPredicted RBP1.34□□□□□ -2.2
MSN5YDR335W PMR1P13586 950 aa1.34□□□□□ -2.2
MSN5YDR335W CLN1P20437 546 aa1.34□□□□□ -2.2
MSN5YDR335W DAL81P21657 970 aa1.34□□□□□ -2.2
MSN5YDR335W SOF1P33750 489 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W PAD1P33751 242 aaKnown RBP RIP-Chip data1.34□□□□□ -2.2not detected
MSN5YDR335W LTV1P34078 463 aa1.34□□□□□ -2.2
MSN5YDR335W THI80P35202 319 aa1.34□□□□□ -2.2
MSN5YDR335W CDS1P38221 457 aa1.34□□□□□ -2.2
MSN5YDR335W SUL1P38359 859 aa1.34□□□□□ -2.2
MSN5YDR335W SIP3P38717 1229 aa1.34□□□□□ -2.2
MSN5YDR335W LIN1P38852 340 aaPredicted RBP1.34□□□□□ -2.2
MSN5YDR335W MPT5P39016 859 aaKnown RBP RIP-Chip data1.34□□□□□ -2.2not detected
MSN5YDR335W SDS3P40505 327 aa1.34□□□□□ -2.2
MSN5YDR335W ABM1P47146 123 aa1.34□□□□□ -2.2
MSN5YDR335W RFX1P48743 811 aa1.34□□□□□ -2.2
MSN5YDR335W MUB1Q03162 620 aa1.34□□□□□ -2.2
MSN5YDR335W TAF12Q03761 539 aa1.34□□□□□ -2.2
MSN5YDR335W CDA2Q06703 312 aa1.34□□□□□ -2.2
MSN5YDR335W FRE3Q08905 711 aa1.34□□□□□ -2.2
MSN5YDR335W YPL216WQ08964 1102 aa1.34□□□□□ -2.2
MSN5YDR335W NMD4Q12129 218 aa1.34□□□□□ -2.2
MSN5YDR335W SPE4Q12455 300 aa1.34□□□□□ -2.2
MSN5YDR335W UTP10P42945 1769 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W CDC37P06101 506 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W SPO7P18410 259 aa1.34□□□□□ -2.2
MSN5YDR335W CRM1P30822 1084 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W DEG1P31115 442 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W SYN8P31377 255 aa1.34□□□□□ -2.2
MSN5YDR335W RPC82P32349 654 aa1.34□□□□□ -2.2
MSN5YDR335W ARC19P33204 171 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W ARP1P38696 384 aa1.34□□□□□ -2.2
MSN5YDR335W MNN9P39107 395 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W RPN3P40016 523 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W SDP1P40479 209 aa1.34□□□□□ -2.2
MSN5YDR335W CHS6P40955 746 aa1.34□□□□□ -2.2
MSN5YDR335W SIP4P46954 829 aa1.34□□□□□ -2.2
MSN5YDR335W HIT1P46973 164 aa1.34□□□□□ -2.2
MSN5YDR335W BIT61P47041 543 aa1.34□□□□□ -2.2
MSN5YDR335W PHB2P50085 310 aa1.34□□□□□ -2.2
MSN5YDR335W COS12P53053 380 aa1.34□□□□□ -2.2
MSN5YDR335W MTL1P53214 551 aa1.34□□□□□ -2.2
MSN5YDR335W VAC7P53950 1165 aa1.34□□□□□ -2.2
MSN5YDR335W REX2P54964 269 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W RPA49Q01080 415 aaPredicted RBP1.34□□□□□ -2.2
MSN5YDR335W MSC2Q03455 724 aa1.34□□□□□ -2.2
MSN5YDR335W GTO3Q04806 366 aa1.34□□□□□ -2.2
MSN5YDR335W RBS1Q05672 457 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W KAP95Q06142 861 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W ARO10Q06408 635 aa1.34□□□□□ -2.2
MSN5YDR335W VAM6Q07468 1049 aa1.34□□□□□ -2.2
MSN5YDR335W LEU9Q12166 604 aaKnown RBP1.34□□□□□ -2.2
MSN5YDR335W POM34Q12445 299 aa1.34□□□□□ -2.2
MSN5YDR335W SPO24Q3E752 67 aa1.34□□□□□ -2.2
MSN5YDR335W YRF1-3P0CX14 1859 aa1.34□□□□□ -2.2
MSN5YDR335W YRF1-7P0CX15 1859 aa1.34□□□□□ -2.2
MSN5YDR335W YRF1-6P53819 1859 aa1.34□□□□□ -2.2
MSN5YDR335W GEA1P47102 1408 aaPredicted RBP1.33□□□□□ -2.2
MSN5YDR335W YLL053CP0CD98 152 aa1.33□□□□□ -2.2
MSN5YDR335W GCD2P12754 651 aaPredicted RBP1.33□□□□□ -2.2
MSN5YDR335W VPS33P20795 691 aa1.33□□□□□ -2.2
MSN5YDR335W MGR1P25573 417 aa1.33□□□□□ -2.2
MSN5YDR335W IMG1P25626 169 aa1.33□□□□□ -2.2
MSN5YDR335W GSY2P27472 705 aa1.33□□□□□ -2.2
MSN5YDR335W GAC1P28006 793 aa1.33□□□□□ -2.2
MSN5YDR335W COY1P34237 679 aa1.33□□□□□ -2.2
MSN5YDR335W KDX1P36005 433 aa1.33□□□□□ -2.2
MSN5YDR335W PPS1P38148 807 aa1.33□□□□□ -2.2
MSN5YDR335W PEX32P38292 413 aa1.33□□□□□ -2.2
MSN5YDR335W MSG5P38590 489 aa1.33□□□□□ -2.2
MSN5YDR335W IMD2P38697 523 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W ALP1P38971 573 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms