RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	GID7	P25569	745 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	RPN2	P32565	945 aa	Known RBP	5.36	□□□□□ -1.55
RPN5	YDL147W	MSN2	P33748	704 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	LEU5	P38702	357 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	EFM4	P40516	257 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	IAH1	P41734	238 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	EOS1	P53938	366 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	RHO4	Q00246	291 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	COQ11	Q05892	277 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	MMR1	Q06324	491 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	GSH2	Q08220	491 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	SMF3	Q12078	473 aa	Predicted RBP	5.36	□□□□□ -1.55
RPN5	YDL147W	VAM3	Q12241	283 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	ARP6	Q12509	438 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	ANP1	P32629	500 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	PDR3	P33200	976 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	SWH1	P35845	1188 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	THI2	P38141	450 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	PSA1	P41940	361 aa	Known RBP	5.35	□□□□□ -1.55
RPN5	YDL147W	RPS0B	P46654	252 aa	Known RBP	5.35	□□□□□ -1.55
RPN5	YDL147W	YGL082W	P53155	381 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	BTN2	P53286	410 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	IZH1	Q03419	316 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	EKI1	Q03764	534 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	RIM13	Q03792	727 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	THI7	Q05998	598 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	NDJ1	Q12366	352 aa		5.35	□□□□□ -1.55
RPN5	YDL147W	ATP10	P18496	279 aa		5.34	□□□□□ -1.55
RPN5	YDL147W	CLN1	P20437	546 aa		5.34	□□□□□ -1.55
RPN5	YDL147W	FUN19	P28003	413 aa	Predicted RBP	5.34	□□□□□ -1.55
RPN5	YDL147W	HIR2	P32480	875 aa		5.34	□□□□□ -1.55
RPN5	YDL147W	CUE2	P36075	443 aa	Known RBP	5.34	□□□□□ -1.55
RPN5	YDL147W	PHD1	P36093	366 aa		5.34	□□□□□ -1.55
RPN5	YDL147W	ERG7	P38604	731 aa		5.34	□□□□□ -1.55
RPN5	YDL147W	YJL132W	P47014	750 aa		5.34	□□□□□ -1.55
RPN5	YDL147W	SMA1	Q02651	245 aa		5.34	□□□□□ -1.55
RPN5	YDL147W	RSF1	Q05043	376 aa		5.34	□□□□□ -1.55
RPN5	YDL147W	YPR089W	O13585	888 aa		5.33	□□□□□ -1.56
RPN5	YDL147W	SGV1	P23293	657 aa	Known RBP	5.33	□□□□□ -1.56
RPN5	YDL147W	XBP1	P40489	647 aa		5.33	□□□□□ -1.56
RPN5	YDL147W	FET5	P43561	622 aa		5.33	□□□□□ -1.56
RPN5	YDL147W	DRN1	P53255	507 aa	Known RBP	5.33	□□□□□ -1.56
RPN5	YDL147W	NCS2	P53923	493 aa	Predicted RBP	5.33	□□□□□ -1.56
RPN5	YDL147W	LGE1	Q02796	332 aa	Known RBP	5.33	□□□□□ -1.56
RPN5	YDL147W	DCS1	Q06151	350 aa		5.33	□□□□□ -1.56
RPN5	YDL147W	DIS3	Q08162	1001 aa	Known RBP	5.33	□□□□□ -1.56
RPN5	YDL147W	UAF30	Q08747	228 aa		5.33	□□□□□ -1.56
RPN5	YDL147W	APL5	Q08951	932 aa	Known RBP	5.33	□□□□□ -1.56
RPN5	YDL147W	FRE6	Q12473	712 aa		5.33	□□□□□ -1.56
RPN5	YDL147W	SUC2	P00724	532 aa		5.32	□□□□□ -1.56
RPN5	YDL147W	MES1	P00958	751 aa	Known RBP	5.32	□□□□□ -1.56
RPN5	YDL147W	RIP1	P08067	215 aa		5.32	□□□□□ -1.56
RPN5	YDL147W	RPL1A	P0CX43	217 aa	Known RBP	5.32	□□□□□ -1.56
RPN5	YDL147W	RPL1B	P0CX44	217 aa	Known RBP	5.32	□□□□□ -1.56
RPN5	YDL147W	BAR1	P12630	587 aa		5.32	□□□□□ -1.56
RPN5	YDL147W	UTR4	P32626	227 aa		5.32	□□□□□ -1.56
RPN5	YDL147W	YNK1	P36010	153 aa	Known RBP	5.32	□□□□□ -1.56
RPN5	YDL147W	RTS2	P40962	232 aa		5.32	□□□□□ -1.56
RPN5	YDL147W	TFG2	P41896	400 aa	Predicted RBP	5.32	□□□□□ -1.56
RPN5	YDL147W	MRPL1	Q04599	285 aa		5.32	□□□□□ -1.56
RPN5	YDL147W	DIC1	Q06143	298 aa		5.32	□□□□□ -1.56
RPN5	YDL147W	LEU4	P06208	619 aa	Known RBP	5.31	□□□□□ -1.56
RPN5	YDL147W	KRE2	P27809	442 aa		5.31	□□□□□ -1.56
RPN5	YDL147W	BEM1	P29366	551 aa		5.31	□□□□□ -1.56
RPN5	YDL147W	RRP3	P38712	501 aa	Known RBP	5.31	□□□□□ -1.56
RPN5	YDL147W	YMR124W	P39523	943 aa	Known RBP	5.31	□□□□□ -1.56
RPN5	YDL147W	GPI1	P53306	609 aa		5.31	□□□□□ -1.56
RPN5	YDL147W	IVY1	Q04934	453 aa		5.31	□□□□□ -1.56
RPN5	YDL147W	HER1	Q12276	1246 aa		5.31	□□□□□ -1.56
RPN5	YDL147W	SKS1	Q12505	502 aa		5.31	□□□□□ -1.56
RPN5	YDL147W	MTR10	Q99189	972 aa		5.31	□□□□□ -1.56
RPN5	YDL147W	YLR278C	Q05854	1341 aa		5.31	□□□□□ -1.56
RPN5	YDL147W	RPL6B	P05739	176 aa	Known RBP	5.3	□□□□□ -1.56
RPN5	YDL147W	LPD1	P09624	499 aa	Known RBP	5.3	□□□□□ -1.56
RPN5	YDL147W	YML002W	P0CF17	737 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	GLK1	P17709	500 aa	Known RBP	5.3	□□□□□ -1.56
RPN5	YDL147W	PTP1	P25044	335 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	ATP11	P32453	318 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	VPS17	P32913	551 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	HEL1	P36113	551 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	KEL1	P38853	1164 aa	Known RBP	5.3	□□□□□ -1.56
RPN5	YDL147W	SER3	P40054	469 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	YMR147W	P40218	223 aa	Known RBP	5.3	□□□□□ -1.56
RPN5	YDL147W	SYG1	P40528	902 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	GAT1	P43574	510 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	DSL1	P53847	754 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	RPL6A	Q02326	176 aa	Known RBP	5.3	□□□□□ -1.56
RPN5	YDL147W	YDR286C	Q05530	114 aa		5.3	□□□□□ -1.56
RPN5	YDL147W	PDE2	P06776	526 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	EXO70	P19658	623 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	AIM17	P23180	465 aa	Known RBP	5.29	□□□□□ -1.56
RPN5	YDL147W	RHB1	P25378	209 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	RPS2	P25443	254 aa	Known RBP	5.29	□□□□□ -1.56
RPN5	YDL147W	KRR1	P25586	316 aa	Predicted RBP	5.29	□□□□□ -1.56
RPN5	YDL147W	PRP21	P32524	280 aa	Predicted RBP	5.29	□□□□□ -1.56
RPN5	YDL147W	MIC60	P36112	540 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	GDT1	P38301	280 aa	Predicted RBP	5.29	□□□□□ -1.56
RPN5	YDL147W	WSS1	P38838	269 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	CSM2	P40465	213 aa		5.29	□□□□□ -1.56
RPN5	YDL147W	YIR016W	P40572	265 aa		5.29	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms