RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W QRI1P43123 477 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W BRE2P43132 505 aa2.02□□□□□ -2.09
USO1YDL058W NET1P47035 1189 aa2.02□□□□□ -2.09
USO1YDL058W LSM8P47093 109 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W STR2P47164 639 aa2.02□□□□□ -2.09
USO1YDL058W CCC1P47818 322 aa2.02□□□□□ -2.09
USO1YDL058W INP52P50942 1183 aa2.02□□□□□ -2.09
USO1YDL058W YGL138CP53122 345 aa2.02□□□□□ -2.09
USO1YDL058W HST3P53687 447 aa2.02□□□□□ -2.09
USO1YDL058W ABF2Q02486 183 aa2.02□□□□□ -2.09
USO1YDL058W ISU1Q03020 165 aa2.02□□□□□ -2.09
USO1YDL058W RLI1Q03195 608 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W NUP53Q03790 475 aa2.02□□□□□ -2.09
USO1YDL058W DXO1Q06349 442 aa2.02□□□□□ -2.09
USO1YDL058W WHI5Q12416 295 aa2.02□□□□□ -2.09
USO1YDL058W VCX1Q99385 411 aa2.02□□□□□ -2.09
USO1YDL058W QCR2P07257 368 aa2.02□□□□□ -2.09
USO1YDL058W NHP6AP11632 93 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W HMG1P12683 1054 aa2.02□□□□□ -2.09
USO1YDL058W AMD2P22580 549 aa2.02□□□□□ -2.09
USO1YDL058W BUD31P25337 157 aaPredicted RBP2.02□□□□□ -2.09
USO1YDL058W GID7P25569 745 aa2.02□□□□□ -2.09
USO1YDL058W YCR061WP25639 631 aa2.02□□□□□ -2.09
USO1YDL058W SUV3P32580 737 aa2.02□□□□□ -2.09
USO1YDL058W TOS1P38288 455 aa2.02□□□□□ -2.09
USO1YDL058W GND1P38720 489 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W SBE22P38814 852 aa2.02□□□□□ -2.09
USO1YDL058W LSM12P38828 187 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W RMD6P39975 231 aa2.02□□□□□ -2.09
USO1YDL058W SMB1P40018 196 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W RGD2P43556 714 aa2.02□□□□□ -2.09
USO1YDL058W BIR1P47134 954 aa2.02□□□□□ -2.09
USO1YDL058W SCY1P53009 804 aa2.02□□□□□ -2.09
USO1YDL058W RPT6Q01939 405 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W MRP51Q02950 344 aa2.02□□□□□ -2.09
USO1YDL058W TIF35Q04067 274 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W HIM1Q06674 414 aa2.02□□□□□ -2.09
USO1YDL058W THI73Q07904 523 aa2.02□□□□□ -2.09
USO1YDL058W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
USO1YDL058W ATG34Q12292 412 aa2.02□□□□□ -2.09
USO1YDL058W YDR262WQ12331 272 aa2.02□□□□□ -2.09
USO1YDL058W YGL041W-AP0C5N3 154 aa2.01□□□□□ -2.09
USO1YDL058W APE1P14904 514 aa2.01□□□□□ -2.09
USO1YDL058W URA6P15700 204 aa2.01□□□□□ -2.09
USO1YDL058W YCL068CP25593 260 aa2.01□□□□□ -2.09
USO1YDL058W TSA1P34760 196 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W YKL075CP36083 450 aa2.01□□□□□ -2.09
USO1YDL058W ALY1P36117 915 aa2.01□□□□□ -2.09
USO1YDL058W STV1P37296 890 aa2.01□□□□□ -2.09
USO1YDL058W YER034WP40022 185 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W MRX1P40050 688 aa2.01□□□□□ -2.09
USO1YDL058W POG1P40473 351 aa2.01□□□□□ -2.09
USO1YDL058W SSU1P41930 458 aa2.01□□□□□ -2.09
USO1YDL058W MTG1Q03151 367 aaPredicted RBP2.01□□□□□ -2.09
USO1YDL058W CAB1Q04430 367 aa2.01□□□□□ -2.09
USO1YDL058W ATG33Q06485 197 aa2.01□□□□□ -2.09
USO1YDL058W ARV1Q06541 321 aa2.01□□□□□ -2.09
USO1YDL058W YDL114WQ07530 308 aa2.01□□□□□ -2.09
USO1YDL058W ISA1Q07821 250 aaPredicted RBP2.01□□□□□ -2.09
USO1YDL058W YDR018CQ12185 396 aa2.01□□□□□ -2.09
USO1YDL058W YGK3Q12222 375 aaPredicted RBP2.01□□□□□ -2.09
USO1YDL058W YBR126W-AQ8TGU7 68 aa2.01□□□□□ -2.09
USO1YDL058W HBN1Q96VH4 193 aa2.01□□□□□ -2.09
USO1YDL058W RPN13O13563 156 aa2.01□□□□□ -2.09
USO1YDL058W TRP2P00899 507 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W YBR121C-AP0C5L4 52 aa2.01□□□□□ -2.09
USO1YDL058W PBI2P0CT04 75 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W RPS24AP0CX31 135 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W RPS24BP0CX32 135 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W UBA1P22515 1024 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W RRT12P25381 491 aa2.01□□□□□ -2.09
USO1YDL058W MDH3P32419 343 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
USO1YDL058W FRE1P32791 686 aa2.01□□□□□ -2.09
USO1YDL058W MAE1P36013 669 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W MRPL10P36520 322 aa2.01□□□□□ -2.09
USO1YDL058W ECM8P38246 354 aa2.01□□□□□ -2.09
USO1YDL058W IML3P38265 245 aa2.01□□□□□ -2.09
USO1YDL058W APD1P38281 316 aa2.01□□□□□ -2.09
USO1YDL058W YHL008CP38750 627 aa2.01□□□□□ -2.09
USO1YDL058W MIP6P38760 659 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W DLD3P39976 496 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W NPP2P39997 493 aa2.01□□□□□ -2.09
USO1YDL058W YJL132WP47014 750 aa2.01□□□□□ -2.09
USO1YDL058W MAD3P47074 515 aa2.01□□□□□ -2.09
USO1YDL058W EXG2P52911 562 aa2.01□□□□□ -2.09
USO1YDL058W NBP1P52919 319 aaPredicted RBP2.01□□□□□ -2.09
USO1YDL058W DBP6P53734 629 aaKnown RBP2.01□□□□□ -2.09
USO1YDL058W DSE4P53753 1117 aa2.01□□□□□ -2.09
USO1YDL058W YNL140CP53910 189 aa2.01□□□□□ -2.09
USO1YDL058W AIM11P87275 137 aa2.01□□□□□ -2.09
USO1YDL058W HAP5Q02516 242 aa2.01□□□□□ -2.09
USO1YDL058W DYN2Q02647 92 aa2.01□□□□□ -2.09
USO1YDL058W RSN1Q03516 953 aa2.01□□□□□ -2.09
USO1YDL058W DYN3Q04949 312 aa2.01□□□□□ -2.09
USO1YDL058W SPH1Q06160 661 aa2.01□□□□□ -2.09
USO1YDL058W SIL1Q08199 421 aa2.01□□□□□ -2.09
USO1YDL058W TCO89Q08921 799 aa2.01□□□□□ -2.09
USO1YDL058W MDY2Q12285 212 aa2.01□□□□□ -2.09
USO1YDL058W SME1Q12330 94 aaPredicted RBP2.01□□□□□ -2.09
USO1YDL058W DFG16Q99234 619 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms