RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	HSL7	P38274	827 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	RCK2	P38623	610 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	STP2	P38704	541 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	DIA4	P38705	446 aa	Predicted RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	SER33	P40510	469 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	PAC11	P40960	533 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	CUS2	P53830	285 aa	Predicted RBP	4.97	□□□□□ -1.61
TUP1	YCR084C	YMR187C	Q03236	431 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	YDR476C	Q03362	224 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	YDR239C	Q03780	787 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	YPR078C	Q06813	372 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	FMP45	Q07651	309 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	MCH5	Q08777	521 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	UBX3	Q12229	455 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	APM4	Q99186	491 aa		4.97	□□□□□ -1.61
TUP1	YCR084C	ARG82	P07250	355 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	RAD18	P10862	487 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	CHS2	P14180	963 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
TUP1	YCR084C	DBR1	P24309	405 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	YBL010C	P32788	280 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	LIP5	P32875	414 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	CTF13	P35203	478 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	SLI15	P38283	698 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	YBP1	P38315	674 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	SUL1	P38359	859 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
TUP1	YCR084C	MNN9	P39107	395 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	SAH1	P39954	449 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	YER121W	P40076	114 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	LCP5	P40079	357 aa	Predicted RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	EMP65	P40085	556 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	SLM1	P40485	686 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	CDC40	P40968	455 aa	Predicted RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	BNA3	P47039	444 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	DAN4	P47179	1161 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	PNC1	P53184	216 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	YGR042W	P53227	271 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	NUP116	Q02630	1113 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	FCP1	Q03254	732 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	ATC1	Q04005	294 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	THI7	Q05998	598 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	PEX15	Q08215	383 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	MED2	Q12124	431 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	RPN6	Q12377	434 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	NFT1	P0CE68	1218 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	STE12	P13574	688 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	CMK2	P22517	447 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	SIS1	P25294	352 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	FUN26	P31381	517 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	DGR2	P32330	852 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	SIP1	P32578	815 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	ALY1	P36117	915 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	AME1	P38313	324 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	YJL206C	P39529	758 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	SER3	P40054	469 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	HPM1	P40481	377 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	UFE1	P41834	346 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	SAD1	P43589	448 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	NBP35	P52920	328 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	RPT4	P53549	437 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	YAT1	P80235	687 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	ACS1	Q01574	713 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	ELP3	Q02908	557 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	ENT5	Q03769	411 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	SMP3	Q04174	516 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	COX20	Q04935	205 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	RGC1	Q06108	1083 aa	Known RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	CTS2	Q06350	511 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	LUC7	Q07508	261 aa	Predicted RBP	4.96	□□□□□ -1.62
TUP1	YCR084C	RSB1	Q08417	382 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	RTR2	Q12378	196 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	YCL001W-B	Q96VH2	84 aa		4.96	□□□□□ -1.62
TUP1	YCR084C	YLR462W	O13556	202 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	GCN4	P03069	281 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	RPL1A	P0CX43	217 aa	Known RBP	4.95	□□□□□ -1.62
TUP1	YCR084C	RPL1B	P0CX44	217 aa	Known RBP	4.95	□□□□□ -1.62
TUP1	YCR084C	FBA1	P14540	359 aa	Known RBP	4.95	□□□□□ -1.62
TUP1	YCR084C	EST1	P17214	699 aa	Predicted RBP	4.95	□□□□□ -1.62
TUP1	YCR084C	DBP5	P20449	482 aa	Known RBP	4.95	□□□□□ -1.62
TUP1	YCR084C	RRT12	P25381	491 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	CIN8	P27895	1000 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	CAP1	P28495	268 aa	Known RBP	4.95	□□□□□ -1.62
TUP1	YCR084C	ELF1	P36053	145 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	THI2	P38141	450 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	YHR112C	P38716	378 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	YHL049C	P38722	271 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	YHR045W	P38775	560 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	SSP120	P39931	234 aa	Known RBP	4.95	□□□□□ -1.62
TUP1	YCR084C	YEL075C	P39972	122 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	YER189W	P40104	122 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	YMR134W	P40207	237 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	MAM33	P40513	266 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	MRPS18	P42847	217 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	YFL064C	P43540	174 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	SIP4	P46954	829 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	MRX6	P48564	524 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	DIA3	P52290	468 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	LIF1	P53150	421 aa		4.95	□□□□□ -1.62
TUP1	YCR084C	ASI2	P53895	289 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms