RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIT2	YCR005C	YDR056C	Q12025	205 aa		7	□□□□□ -1.29
CIT2	YCR005C	UPC2	Q12151	913 aa		7	□□□□□ -1.29
CIT2	YCR005C	YAR066W	P0CX18	203 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	YHR214W	P0CX19	203 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	ATP11	P32453	318 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	RFC3	P38629	340 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	YHR020W	P38708	688 aa	Known RBP	6.99	□□□□□ -1.29
CIT2	YCR005C	ARB1	P40024	610 aa	Known RBP	6.99	□□□□□ -1.29
CIT2	YCR005C	CCT7	P42943	550 aa	Known RBP	6.99	□□□□□ -1.29
CIT2	YCR005C	SNO2	P53823	222 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	YNL260C	P53846	198 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	YML131W	Q03102	365 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	YMR102C	Q03177	834 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	SPC24	Q04477	213 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	GTB1	Q04924	702 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	RIF2	Q06208	395 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	SAM4	Q08985	325 aa	Known RBP	6.99	□□□□□ -1.29
CIT2	YCR005C	SRN2	Q99176	213 aa		6.99	□□□□□ -1.29
CIT2	YCR005C	CRM1	P30822	1084 aa	Known RBP	6.98	□□□□□ -1.29
CIT2	YCR005C	MVD1	P32377	396 aa	Known RBP	6.98	□□□□□ -1.29
CIT2	YCR005C	CTP1	P38152	299 aa		6.98	□□□□□ -1.29
CIT2	YCR005C	BAT1	P38891	393 aa	Known RBP	6.98	□□□□□ -1.29
CIT2	YCR005C	GIM4	P40005	111 aa	Known RBP	6.98	□□□□□ -1.29
CIT2	YCR005C	RLP7	P40693	322 aa	Known RBP	6.98	□□□□□ -1.29
CIT2	YCR005C	ELA1	P53861	379 aa	Predicted RBP	6.98	□□□□□ -1.29
CIT2	YCR005C	YNL010W	P53981	241 aa	Known RBP	6.98	□□□□□ -1.29
CIT2	YCR005C	YPL113C	Q02961	396 aa		6.98	□□□□□ -1.29
CIT2	YCR005C	RCF1	Q03713	159 aa		6.98	□□□□□ -1.29
CIT2	YCR005C	TRM12	Q04235	462 aa		6.98	□□□□□ -1.29
CIT2	YCR005C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	6.98	□□□□□ -1.29	not detected
CIT2	YCR005C	RPN8	Q08723	338 aa	Known RBP	6.98	□□□□□ -1.29
CIT2	YCR005C	VPS68	Q12016	184 aa		6.98	□□□□□ -1.29
CIT2	YCR005C	BRR1	Q99177	341 aa	Predicted RBP	6.98	□□□□□ -1.29
CIT2	YCR005C	CAR1	P00812	333 aa	Known RBP	6.97	□□□□□ -1.29
CIT2	YCR005C	TRP3	P00937	484 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	CDC21	P06785	304 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	COS2	P0CX12	379 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	COS3	P0CX13	379 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	GUK1	P15454	187 aa	Known RBP	6.97	□□□□□ -1.29
CIT2	YCR005C	PRP6	P19735	899 aa	Predicted RBP	6.97	□□□□□ -1.29
CIT2	YCR005C	ARG1	P22768	420 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	NFS1	P25374	497 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	BUB2	P26448	306 aa	Predicted RBP	6.97	□□□□□ -1.29
CIT2	YCR005C	RML2	P32611	393 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	FZO1	P38297	855 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	NPT1	P39683	429 aa	Known RBP	6.97	□□□□□ -1.29
CIT2	YCR005C	EMP65	P40085	556 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	COS4	P43542	379 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	YJR154W	P47181	346 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	NNF2	P53253	936 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	REX2	P54964	269 aa	Known RBP	6.97	□□□□□ -1.29
CIT2	YCR005C	FMN1	Q03778	218 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	YML053C	Q04978	212 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	YLR049C	Q12110	428 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	ERP4	Q12450	207 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	NAG1	Q8TGN9	163 aa		6.97	□□□□□ -1.29
CIT2	YCR005C	COX3	P00420	269 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	INH1	P01097	85 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	MET8	P15807	274 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	PWP1	P21304	576 aa	Known RBP	6.96	□□□□□ -1.29
CIT2	YCR005C	MSB1	P21339	1137 aa	Known RBP	6.96	□□□□□ -1.29
CIT2	YCR005C	SPR1	P32603	445 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	SDH3	P33421	198 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	RPS1A	P33442	255 aa	Known RBP	6.96	□□□□□ -1.29
CIT2	YCR005C	LRG1	P35688	1017 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	KAE1	P36132	386 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	MUM2	P38236	366 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	SEC27	P41811	889 aa	Known RBP	6.96	□□□□□ -1.29
CIT2	YCR005C	PFA3	P42836	336 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	GAT1	P43574	510 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	TMA22	P47089	198 aa	Predicted RBP	6.96	□□□□□ -1.29
CIT2	YCR005C	MDM34	P53083	459 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	HEL2	Q05580	639 aa	Known RBP	6.96	□□□□□ -1.29
CIT2	YCR005C	PLB3	Q08108	686 aa		6.96	□□□□□ -1.29
CIT2	YCR005C	YPL225W	Q08971	146 aa	Known RBP	6.96	□□□□□ -1.29
CIT2	YCR005C	RRP42	Q12277	265 aa	Predicted RBP	6.96	□□□□□ -1.29
CIT2	YCR005C	RIB2	Q12362	591 aa	Known RBP	6.96	□□□□□ -1.29
CIT2	YCR005C	PHO5	P00635	467 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	TUB1	P09733	447 aa	Known RBP	6.95	□□□□□ -1.3
CIT2	YCR005C	VPS34	P22543	875 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	SYP1	P25623	870 aa	Known RBP	6.95	□□□□□ -1.3
CIT2	YCR005C	RAD14	P28519	371 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	CUE2	P36075	443 aa	Known RBP	6.95	□□□□□ -1.3
CIT2	YCR005C	SRX1	P36077	127 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	ARN1	P38731	627 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	UBA4	P38820	440 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	YHR127W	P38833	243 aa	Known RBP	6.95	□□□□□ -1.3
CIT2	YCR005C	PCF11	P39081	626 aa	Predicted RBP	6.95	□□□□□ -1.3
CIT2	YCR005C	GIP4	P39732	760 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	YEL073C	P39974	107 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	TIF34	P40217	347 aa	Known RBP	6.95	□□□□□ -1.3
CIT2	YCR005C	FKH2	P41813	862 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	YJR149W	P47177	404 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	TIS11	P47977	285 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	MPS2	P53159	387 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	ESA1	Q08649	445 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	PST1	Q12355	444 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	SAS5	Q99314	248 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	STE3	P06783	470 aa		6.95	□□□□□ -1.3
CIT2	YCR005C	RPS4A	P0CX35	261 aa	Known RBP	6.95	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms