RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 APL5Q08951 932 aaKnown RBP8.11□□□□□ -1.11
NME1NME1 SNU66Q12420 587 aaPredicted RBP8.11□□□□□ -1.11
NME1NME1 YFL068WP0CX99 160 aa8.1□□□□□ -1.11
NME1NME1 YLL066W-AP0CY00 160 aa8.1□□□□□ -1.11
NME1NME1 YLL067W-AP0CY01 160 aa8.1□□□□□ -1.11
NME1NME1 SRV2P17555 526 aaKnown RBP8.1□□□□□ -1.11
NME1NME1 ACH1P32316 526 aa8.1□□□□□ -1.11
NME1NME1 UTR4P32626 227 aa8.1□□□□□ -1.11
NME1NME1 ATO2P32907 282 aa8.1□□□□□ -1.11
NME1NME1 YNK1P36010 153 aaKnown RBP8.1□□□□□ -1.11
NME1NME1 YIL152WP40455 235 aa8.1□□□□□ -1.11
NME1NME1 TDA7P53882 636 aaPredicted RBP8.1□□□□□ -1.11
NME1NME1 YLR281CQ05863 155 aa8.1□□□□□ -1.11
NME1NME1 THI20Q08224 551 aa8.1□□□□□ -1.11
NME1NME1 GPH1P06738 902 aaKnown RBP8.09□□□□□ -1.11
NME1NME1 APE1P14904 514 aa8.09□□□□□ -1.11
NME1NME1 RAD24P32641 659 aa8.09□□□□□ -1.11
NME1NME1 CBP4P37267 147 aa8.09□□□□□ -1.11
NME1NME1 ARA1P38115 344 aa8.09□□□□□ -1.11
NME1NME1 EFM2P38347 419 aa8.09□□□□□ -1.11
NME1NME1 KEL1P38853 1164 aaKnown RBP8.09□□□□□ -1.11
NME1NME1 CAK1P43568 368 aaPredicted RBP8.09□□□□□ -1.11
NME1NME1 SXM1Q04175 944 aaKnown RBP8.09□□□□□ -1.11
NME1NME1 GEP3Q08622 556 aa8.09□□□□□ -1.11
NME1NME1 MES1P00958 751 aaKnown RBP8.08□□□□□ -1.12
NME1NME1 MDH1P17505 334 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
NME1NME1 SEC62P21825 274 aa8.08□□□□□ -1.12
NME1NME1 YCR007CP25354 239 aa8.08□□□□□ -1.12
NME1NME1 ERV1P27882 189 aa8.08□□□□□ -1.12
NME1NME1 ATP11P32453 318 aa8.08□□□□□ -1.12
NME1NME1 ECM15P35195 104 aa8.08□□□□□ -1.12
NME1NME1 BLI1P35727 113 aa8.08□□□□□ -1.12
NME1NME1 LRP1P38801 184 aaKnown RBP8.08□□□□□ -1.12
NME1NME1 CSM2P40465 213 aa8.08□□□□□ -1.12
NME1NME1 AZF1P41696 914 aa8.08□□□□□ -1.12
NME1NME1 COS5P47187 383 aa8.08□□□□□ -1.12
NME1NME1 GPI1P53306 609 aa8.08□□□□□ -1.12
NME1NME1 PHO92Q06390 306 aa8.08□□□□□ -1.12
NME1NME1 COS7Q07788 383 aa8.08□□□□□ -1.12
NME1NME1 RGT2Q12300 763 aa8.08□□□□□ -1.12
NME1NME1 CPR2P23285 205 aa8.07□□□□□ -1.12
NME1NME1 SNT1P25357 1226 aa8.07□□□□□ -1.12
NME1NME1 ERG1P32476 496 aaKnown RBP8.07□□□□□ -1.12
NME1NME1 REC114P32841 428 aa8.07□□□□□ -1.12
NME1NME1 ARC40P38328 384 aaKnown RBP8.07□□□□□ -1.12
NME1NME1 OSH3P38713 996 aaKnown RBP8.07□□□□□ -1.12
NME1NME1 YER130CP39959 443 aa8.07□□□□□ -1.12
NME1NME1 YTA12P40341 825 aa8.07□□□□□ -1.12
NME1NME1 SCD6P45978 349 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
NME1NME1 VPS9P54787 451 aa8.07□□□□□ -1.12
NME1NME1 SKO1Q02100 647 aa8.07□□□□□ -1.12
NME1NME1 SLD5Q03406 294 aa8.07□□□□□ -1.12
NME1NME1 SNA4Q07549 140 aa8.07□□□□□ -1.12
NME1NME1 YEH2Q07950 538 aa8.07□□□□□ -1.12
NME1NME1 ATP10P18496 279 aa8.06□□□□□ -1.12
NME1NME1 HNM1P19807 563 aa8.06□□□□□ -1.12
NME1NME1 RPN2P32565 945 aaKnown RBP8.06□□□□□ -1.12
NME1NME1 GYP6P32806 458 aa8.06□□□□□ -1.12
NME1NME1 YMR147WP40218 223 aaKnown RBP8.06□□□□□ -1.12
NME1NME1 YIR014WP40570 242 aa8.06□□□□□ -1.12
NME1NME1 GUF1P46943 645 aa8.06□□□□□ -1.12
NME1NME1 TCB2P48231 1178 aa8.06□□□□□ -1.12
NME1NME1 DIG1Q03063 452 aaKnown RBP8.06□□□□□ -1.12
NME1NME1 CFT2Q12102 859 aaPredicted RBP8.06□□□□□ -1.12
NME1NME1 YPT53P36019 220 aa8.05□□□□□ -1.12
NME1NME1 PIM1P36775 1133 aa8.05□□□□□ -1.12
NME1NME1 THI2P38141 450 aa8.05□□□□□ -1.12
NME1NME1 SYG1P40528 902 aa8.05□□□□□ -1.12
NME1NME1 CUL3P53202 744 aa8.05□□□□□ -1.12
NME1NME1 SEC5P89102 971 aa8.05□□□□□ -1.12
NME1NME1 AFT2Q08957 416 aa8.05□□□□□ -1.12
NME1NME1 LSP1Q12230 341 aaKnown RBP8.05□□□□□ -1.12
NME1NME1 GLK1P17709 500 aaKnown RBP8.04□□□□□ -1.12
NME1NME1 FUN19P28003 413 aaPredicted RBP8.04□□□□□ -1.12
NME1NME1 TRS65P32893 560 aa8.04□□□□□ -1.12
NME1NME1 NIP100P33420 868 aa8.04□□□□□ -1.12
NME1NME1 VHC1P38329 1120 aa8.04□□□□□ -1.12
NME1NME1 RCF1Q03713 159 aa8.04□□□□□ -1.12
NME1NME1 NRT1Q08485 598 aa8.04□□□□□ -1.12
NME1NME1 CSR2Q12734 1121 aa8.04□□□□□ -1.12
NME1NME1 RRT2P38332 387 aa8.03□□□□□ -1.12
NME1NME1 YIL169CP40442 995 aa8.03□□□□□ -1.12
NME1NME1 TFG2P41896 400 aaPredicted RBP8.03□□□□□ -1.12
NME1NME1 BUD27P43573 796 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
NME1NME1 HOT1Q03213 719 aa8.03□□□□□ -1.12
NME1NME1 RBA50Q04418 439 aa8.03□□□□□ -1.12
NME1NME1 FMP42Q04991 504 aa8.03□□□□□ -1.12
NME1NME1 HSP42Q12329 375 aa8.03□□□□□ -1.12
NME1NME1 LEU4P06208 619 aaKnown RBP8.02□□□□□ -1.13
NME1NME1 GLN3P18494 730 aa8.02□□□□□ -1.13
NME1NME1 EXO70P19658 623 aa8.02□□□□□ -1.13
NME1NME1 MET30P39014 640 aa8.02□□□□□ -1.13
NME1NME1 NCS2P53923 493 aaPredicted RBP8.02□□□□□ -1.13
NME1NME1 ERO1Q03103 563 aa8.02□□□□□ -1.13
NME1NME1 YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
NME1NME1 VAM3Q12241 283 aa8.02□□□□□ -1.13
NME1NME1 HSP82P02829 709 aaKnown RBP8.01□□□□□ -1.13
NME1NME1 RIP1P08067 215 aa8.01□□□□□ -1.13
NME1NME1 YCR043CP25361 127 aa8.01□□□□□ -1.13
NME1NME1 FRE1P32791 686 aa8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms