RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 GLIS3Q8NEA6 775 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 NYXQ9GZU5 481 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 A0A1W2PQJ5 194 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 ANO9A1A5B4 782 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 PPP4CP60510 307 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 CDK17Q00537 523 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 CKAP4Q07065 602 aaKnown RBP15.39■□□□□ 0.05
PHGDH-233ENST00000642021 CCDC96Q2M329 555 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 FAM114A1Q8IWE2 563 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 WDR66Q8TBY9 1149 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 CCDC47Q96A33 483 aaKnown RBP15.39■□□□□ 0.05
PHGDH-233ENST00000642021 PNMA5Q96PV4 448 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 EYA3Q99504 573 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 NUDT12Q9BQG2 462 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 C6orf50Q9HD87 102 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 SMARCAL1Q9NZC9 954 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 SPATA31A5Q5VU36 1347 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 SPATA31A7Q8IWB4 1347 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 CASZ1Q86V15 1759 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 MOCS3O95396 460 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 BAG3O95817 575 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 GGCXP38435 758 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 VWA3BQ502W6 1294 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 FKBP15Q5T1M5 1219 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 CNNM4Q6P4Q7 775 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 TPTE2Q6XPS3 522 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 SRLQ86TD4 932 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 RPGRIP1Q96KN7 1286 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 PSMB7Q99436 277 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 SELENOOQ9BVL4 669 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 NDST4Q9H3R1 872 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 CWC15Q9P013 229 aaKnown RBP15.39■□□□□ 0.05
PHGDH-233ENST00000642021 SALL4Q9UJQ4 1053 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 SNX12Q9UMY4 172 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 PCDHA13Q9Y5I0 950 aa15.39■□□□□ 0.05
PHGDH-233ENST00000642021 HNRNPH3P31942 346 aaKnown RBP15.38■□□□□ 0.05
PHGDH-233ENST00000642021 EIF4A3P38919 411 aaKnown RBP15.38■□□□□ 0.05
PHGDH-233ENST00000642021 SPA17Q15506 151 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 CCDC155Q8N6L0 562 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 LZTS2Q9BRK4 669 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 RTFDC1Q9BY42 306 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-233ENST00000642021 IFIH1Q9BYX4 1025 aaKnown RBP15.38■□□□□ 0.05
PHGDH-233ENST00000642021 PLEKHA4Q9H4M7 779 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 DMGDHQ9UI17 866 aaKnown RBP15.38■□□□□ 0.05
PHGDH-233ENST00000642021 USP17L5A8MUK1 530 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 SLC37A4O43826 429 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 GNA11P29992 359 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 CXCR5P32302 372 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 AMPD3Q01432 767 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 C10orf67Q8IYJ2 551 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 ANKRD13CQ8N6S4 541 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 CEP95Q96GE4 821 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 MTMR9Q96QG7 549 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 ACBD3Q9H3P7 528 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 MMRN2Q9H8L6 949 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 EHD2Q9NZN4 543 aa15.38■□□□□ 0.05
PHGDH-233ENST00000642021 RRP15Q9Y3B9 282 aaKnown RBP15.38■□□□□ 0.05
PHGDH-233ENST00000642021 RPS6KA5O75582 802 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 KIF11P52732 1056 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 MAP9Q49MG5 647 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 SV2BQ7L1I2 683 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 KCNK18Q7Z418 384 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 AMOTL1Q8IY63 956 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 RRP36Q96EU6 259 aaKnown RBP15.37■□□□□ 0.05
PHGDH-233ENST00000642021 CALML4Q96GE6 196 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 LRRC1Q9BTT6 524 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 SH2D4AQ9H788 454 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 ROBO1Q9Y6N7 1651 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 SNED1Q8TER0 1413 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 POTEMA6NI47 508 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 TDP2O95551 362 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 MCM3P25205 808 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 LRRC41Q15345 812 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 COBLL1Q53SF7 1204 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 NEDD1Q8NHV4 660 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 JRKLQ9Y4A0 524 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 CNTNAP4Q9C0A0 1308 aa15.37■□□□□ 0.05
PHGDH-233ENST00000642021 LRRC53A6NM62 1247 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 BTDP43251 543 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 SOGA3Q5TF21 947 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 NFRKBQ6P4R8 1299 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 RRAGAQ7L523 313 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 REXO1Q8N1G1 1221 aaKnown RBP15.36■□□□□ 0.05
PHGDH-233ENST00000642021 COA7Q96BR5 231 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 COL5A3P25940 1745 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-233ENST00000642021 GNPATO15228 680 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 NCK2O43639 380 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 ZPR1O75312 459 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 MATR3P43243 847 aaKnown RBP eCLIP15.36■□□□□ 0.05
PHGDH-233ENST00000642021 C16orf86Q6ZW13 317 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 UNC13DQ70J99 1090 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 TRIM58Q8NG06 486 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 AFAP1L1Q8TED9 768 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 BAP1Q92560 729 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 CCDC88AQ3V6T2 1871 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 RPS6KA4O75676 772 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 SLC7A5Q01650 507 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 SPATA4Q8NEY3 305 aa15.36■□□□□ 0.05
PHGDH-233ENST00000642021 LARP4BQ92615 738 aaKnown RBP15.36■□□□□ 0.05
PHGDH-233ENST00000642021 GJA10Q969M2 543 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms