RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 UPF3AQ9H1J1 476 aaKnown RBP20.01■□□□□ 0.79
PHGDH-227ENST00000641811 GNEQ9Y223 722 aaKnown RBP20.01■□□□□ 0.79
PHGDH-227ENST00000641811 CYP46A1Q9Y6A2 500 aa20.01■□□□□ 0.79
PHGDH-227ENST00000641811 CNTNAP5Q8WYK1 1306 aa20.01■□□□□ 0.79
PHGDH-227ENST00000641811 CTAGE5O15320 804 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 METAP2P50579 478 aaKnown RBP eCLIP20■□□□□ 0.791e-6■■□□□ 12.1
PHGDH-227ENST00000641811 GJA9P57773 515 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 BEX3Q00994 111 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 TOB2Q14106 344 aaPredicted RBP20■□□□□ 0.79
PHGDH-227ENST00000641811 KCNA10Q16322 511 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 CCSAPQ6IQ19 270 aaPredicted RBP20■□□□□ 0.79
PHGDH-227ENST00000641811 FCHSD1Q86WN1 690 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 LARP6Q9BRS8 491 aaKnown RBP20■□□□□ 0.79
PHGDH-227ENST00000641811 WDR11Q9BZH6 1224 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 PXMP2Q9NR77 195 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 PCDH10Q9P2E7 1040 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 PHF24Q9UPV7 400 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 DNAH12Q6ZR08 3092 aa20■□□□□ 0.79
PHGDH-227ENST00000641811 RBM47A0AV96 593 aaKnown RBP19.99■□□□□ 0.79
PHGDH-227ENST00000641811 B4DLN1 442 aa19.99■□□□□ 0.79
PHGDH-227ENST00000641811 DYNC1LI2O43237 492 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-227ENST00000641811 MRPL12P52815 198 aaKnown RBP19.99■□□□□ 0.79
PHGDH-227ENST00000641811 RCAN1P53805 252 aa19.99■□□□□ 0.79
PHGDH-227ENST00000641811 GNASQ5JWF2 1037 aa19.99■□□□□ 0.79
PHGDH-227ENST00000641811 TLK2Q86UE8 772 aa19.99■□□□□ 0.79
PHGDH-227ENST00000641811 GPKOWQ92917 476 aaPredicted RBP eCLIP19.99■□□□□ 0.79
PHGDH-227ENST00000641811 MAP3K20Q9NYL2 800 aaKnown RBP19.99■□□□□ 0.79
PHGDH-227ENST00000641811 NR2E3Q9Y5X4 410 aa19.99■□□□□ 0.79
PHGDH-227ENST00000641811 V9GY48 417 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-227ENST00000641811 CEP290O15078 2479 aa19.99■□□□□ 0.79
PHGDH-227ENST00000641811 A0A1W2PQ45 241 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-227ENST00000641811 A0A1W2PQY0 241 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 NR3C2P08235 984 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 ACLYP53396 1101 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 USP17L6PQ6QN14 398 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 SLC39A5Q6ZMH5 540 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 HEATR3Q7Z4Q2 680 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 SAMD3Q8N6K7 520 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 IL31RAQ8NI17 732 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 IWS1Q96ST2 819 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 TSEN34Q9BSV6 310 aaKnown RBP19.98■□□□□ 0.79
PHGDH-227ENST00000641811 AP5M1Q9H0R1 490 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 SPC25Q9HBM1 224 aa19.98■□□□□ 0.79
PHGDH-227ENST00000641811 MYCLP12524 364 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-227ENST00000641811 CST5P28325 142 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-227ENST00000641811 PDIA3P30101 505 aaKnown RBP19.97■□□□□ 0.79
PHGDH-227ENST00000641811 RTP1P59025 263 aa19.97■□□□□ 0.79
PHGDH-227ENST00000641811 STXBP2Q15833 593 aa19.97■□□□□ 0.79
PHGDH-227ENST00000641811 DUSP28Q4G0W2 176 aa19.97■□□□□ 0.79
PHGDH-227ENST00000641811 SEPT14Q6ZU15 432 aa19.97■□□□□ 0.79
PHGDH-227ENST00000641811 COPS5Q92905 334 aa19.97■□□□□ 0.79
PHGDH-227ENST00000641811 ZFP91Q96JP5 570 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-227ENST00000641811 PDCD2LQ9BRP1 358 aa19.97■□□□□ 0.79
PHGDH-227ENST00000641811 PDRG1Q9NUG6 133 aa19.97■□□□□ 0.79
PHGDH-227ENST00000641811 ZMYND8Q9ULU4 1186 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-227ENST00000641811 MEIS2O14770 477 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 PPFIA3O75145 1194 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 ARIH2O95376 493 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 ASGR1P07306 291 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 SYN1P17600 705 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 EVCP57679 992 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 CCT2P78371 535 aaKnown RBP19.96■□□□□ 0.79
PHGDH-227ENST00000641811 PGM5Q15124 567 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 WWC2Q6AWC2 1192 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 SCFD2Q8WU76 684 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 NCOA5Q9HCD5 579 aaKnown RBP19.96■□□□□ 0.79
PHGDH-227ENST00000641811 ATP11BQ9Y2G3 1177 aa19.96■□□□□ 0.79
PHGDH-227ENST00000641811 TXNP10599 105 aaKnown RBP19.95■□□□□ 0.78
PHGDH-227ENST00000641811 NKX3-2P78367 333 aa19.95■□□□□ 0.78
PHGDH-227ENST00000641811 PPP2R5BQ15173 497 aa19.95■□□□□ 0.78
PHGDH-227ENST00000641811 FSCN1Q16658 493 aaKnown RBP19.95■□□□□ 0.78
PHGDH-227ENST00000641811 C8orf34Q49A92 452 aa19.95■□□□□ 0.78
PHGDH-227ENST00000641811 TYW1BQ6NUM6 668 aa19.95■□□□□ 0.78
PHGDH-227ENST00000641811 PCSK9Q8NBP7 692 aaKnown RBP19.95■□□□□ 0.78
PHGDH-227ENST00000641811 SMARCC2Q8TAQ2 1214 aa19.95■□□□□ 0.78
PHGDH-227ENST00000641811 PSTPIP2Q9H939 334 aa19.95■□□□□ 0.78
PHGDH-227ENST00000641811 Q9Y3F1 56 aa19.95■□□□□ 0.78
PHGDH-227ENST00000641811 NID2Q14112 1375 aa19.95■□□□□ 0.78
PHGDH-227ENST00000641811 CCDC196A0A1B0GTZ2 297 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 MOXD2PA6NHM9 499 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 EIF3JO75822 258 aaKnown RBP19.94■□□□□ 0.78
PHGDH-227ENST00000641811 ANAPC15P60006 121 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 UBE2SQ16763 222 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 LY6KQ17RY6 165 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 TRIM60Q495X7 471 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 CCDC62Q6P9F0 684 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 VSIG10LQ86VR7 867 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 CUL5Q93034 780 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 PHKBQ93100 1093 aa19.94■□□□□ 0.78
PHGDH-227ENST00000641811 PIK3CDO00329 1044 aa19.93■□□□□ 0.78
PHGDH-227ENST00000641811 RGS20O76081 388 aa19.93■□□□□ 0.78
PHGDH-227ENST00000641811 TTLL4Q14679 1199 aa19.93■□□□□ 0.78
PHGDH-227ENST00000641811 SNX17Q15036 470 aa19.93■□□□□ 0.78
PHGDH-227ENST00000641811 CXCL17Q6UXB2 119 aa19.93■□□□□ 0.78
PHGDH-227ENST00000641811 OR6J1Q8NGC5 347 aa19.93■□□□□ 0.78
PHGDH-227ENST00000641811 VTI1AQ96AJ9 217 aa19.93■□□□□ 0.78
PHGDH-227ENST00000641811 STARD7Q9NQZ5 370 aa19.93■□□□□ 0.78
PHGDH-227ENST00000641811 STXBP3O00186 592 aa19.92■□□□□ 0.78
PHGDH-227ENST00000641811 CCND2P30279 289 aa19.92■□□□□ 0.78
PHGDH-227ENST00000641811 NAPAP54920 295 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms