RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 RAB21Q9UL25 225 aa18.77■□□□□ 0.6
PHGDH-223ENST00000641597 CACNB3P54284 484 aa18.77■□□□□ 0.59
PHGDH-223ENST00000641597 BRD3Q15059 726 aa18.77■□□□□ 0.59
PHGDH-223ENST00000641597 TSR1Q2NL82 804 aaKnown RBP18.77■□□□□ 0.59
PHGDH-223ENST00000641597 RIOX1Q9H6W3 641 aa18.77■□□□□ 0.59
PHGDH-223ENST00000641597 TAL1P17542 331 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-223ENST00000641597 MEA1Q16626 185 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 DOK7Q18PE1 504 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 CRY2Q49AN0 593 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 CALML4Q96GE6 196 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 ZNF287Q9HBT7 754 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 L1RE1Q9UN81 338 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 WHAMMP3Q1A5X7 153 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 SV2BQ7L1I2 683 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 ZFPM1Q8IX07 1006 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 ANKRD13CQ8N6S4 541 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 SNX29Q8TEQ0 813 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 JMJD4Q9H9V9 463 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 MLXIPQ9HAP2 919 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 SMARCAL1Q9NZC9 954 aa18.76■□□□□ 0.59
PHGDH-223ENST00000641597 LRRIQ3A6PVS8 624 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-223ENST00000641597 PSMD14O00487 310 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 ZBTB22O15209 634 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 TOM1O60784 492 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 ADCY7P51828 1080 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 C2CD5Q86YS7 1000 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 ADGRF4Q8IZF3 695 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 LARP4BQ92615 738 aaKnown RBP18.75■□□□□ 0.59
PHGDH-223ENST00000641597 HAUS4Q9H6D7 363 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 KCNQ5Q9NR82 932 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 MYH10P35580 1976 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L10C9JJH3 530 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 SSBP05455 408 aaKnown RBP eCLIP18.75■□□□□ 0.59
PHGDH-223ENST00000641597 MYL1P05976 194 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 MMRN2Q9H8L6 949 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 ARHGAP20Q9P2F6 1191 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 CAPN6Q9Y6Q1 641 aa18.75■□□□□ 0.59
PHGDH-223ENST00000641597 GAKO14976 1311 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 NPHP3-ACAD11A0A0J9YXS1 232 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 MPHOSPH10O00566 681 aaKnown RBP18.74■□□□□ 0.59
PHGDH-223ENST00000641597 ATP8B1O43520 1251 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 ATP2B4P23634 1241 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 HNRNPH2P55795 449 aaKnown RBP18.74■□□□□ 0.59
PHGDH-223ENST00000641597 SNAP25P60880 206 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 ZBED6P86452 979 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 NFIAQ12857 509 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 DDX12PQ92771 950 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 EHD2Q9NZN4 543 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 VPS18Q9P253 973 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 SAR1BQ9Y6B6 198 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 ADAMTSL1Q8N6G6 1762 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 BICDL2A1A5D9 508 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 CENPPQ6IPU0 288 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 C15orf52Q6ZUT6 534 aaKnown RBP18.74■□□□□ 0.59
PHGDH-223ENST00000641597 CDK5RAP3Q96JB5 506 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 CUEDC2Q9H467 287 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 MYO1AQ9UBC5 1043 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 ADAM21Q9UKJ8 722 aa18.74■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 MYBL2P10244 700 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 CASP8Q14790 479 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 CNNM4Q6P4Q7 775 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 USP17L6PQ6QN14 398 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-223ENST00000641597 ZSCAN29Q8IWY8 852 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-223ENST00000641597 HAS1Q92839 578 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 CXCR5P32302 372 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 GABPAQ06546 454 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 FNBP4Q8N3X1 1017 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-223ENST00000641597 NDST4Q9H3R1 872 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 POLD4Q9HCU8 107 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 SIK3Q9Y2K2 1263 aa18.73■□□□□ 0.59
PHGDH-223ENST00000641597 C2orf54Q08AI8 447 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 EZH2Q15910 746 aaKnown RBP18.72■□□□□ 0.59
PHGDH-223ENST00000641597 CCDC96Q2M329 555 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 VWA3BQ502W6 1294 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 RBM17Q96I25 401 aaKnown RBP18.72■□□□□ 0.59
PHGDH-223ENST00000641597 JADE2Q9NQC1 790 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 ZNHIT6Q9NWK9 470 aaKnown RBP18.72■□□□□ 0.59
PHGDH-223ENST00000641597 SALL4Q9UJQ4 1053 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 FAN1Q9Y2M0 1017 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 UTRNP46939 3433 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 LRRC53A6NM62 1247 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 RRAGAQ7L523 313 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 HDXQ7Z353 690 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 TMC4Q7Z404 712 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 CERKQ8TCT0 537 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 HNRNPLLQ8WVV9 542 aaKnown RBP18.72■□□□□ 0.59
PHGDH-223ENST00000641597 RAD54LQ92698 747 aa18.72■□□□□ 0.59
PHGDH-223ENST00000641597 CCDC47Q96A33 483 aaKnown RBP18.72■□□□□ 0.59
PHGDH-223ENST00000641597 ZFP91Q96JP5 570 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-223ENST00000641597 E9PMD0 336 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms