RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 SCFD2Q8WU76 684 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 PPM1EQ8WY54 764 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 MPHOSPH6Q99547 160 aaKnown RBP19.54■□□□□ 0.72
PHGDH-213ENST00000641272 MTG1Q9BT17 334 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-213ENST00000641272 DSCC1Q9BVC3 393 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 MTIF3Q9H2K0 278 aaKnown RBP19.54■□□□□ 0.72
PHGDH-213ENST00000641272 GPHNQ9NQX3 736 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-213ENST00000641272 COL20A1Q9P218 1284 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 PNMA2Q9UL42 364 aa19.54■□□□□ 0.72
PHGDH-213ENST00000641272 YBX2Q9Y2T7 364 aaKnown RBP19.54■□□□□ 0.72
PHGDH-213ENST00000641272 ABCB11O95342 1321 aa19.53■□□□□ 0.72
PHGDH-213ENST00000641272 HIP1O00291 1037 aa19.53■□□□□ 0.72
PHGDH-213ENST00000641272 RABGGTBP53611 331 aa19.53■□□□□ 0.72
PHGDH-213ENST00000641272 NBPF20Q3BBV1 942 aa19.53■□□□□ 0.72
PHGDH-213ENST00000641272 ASPRV1Q53RT3 343 aa19.53■□□□□ 0.72
PHGDH-213ENST00000641272 DEFB128Q7Z7B8 93 aa19.53■□□□□ 0.72
PHGDH-213ENST00000641272 DNERQ8NFT8 737 aa19.53■□□□□ 0.72
PHGDH-213ENST00000641272 VAT1LQ9HCJ6 419 aa19.53■□□□□ 0.72
PHGDH-213ENST00000641272 PRDM6Q9NQX0 595 aa19.53■□□□□ 0.72
PHGDH-213ENST00000641272 GSPT1P15170 499 aaKnown RBP19.52■□□□□ 0.72
PHGDH-213ENST00000641272 TAAR1Q96RJ0 339 aa19.52■□□□□ 0.72
PHGDH-213ENST00000641272 GAS2L1Q99501 681 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-213ENST00000641272 UBAC1Q9BSL1 405 aa19.52■□□□□ 0.72
PHGDH-213ENST00000641272 ZSWIM5Q9P217 1185 aa19.52■□□□□ 0.72
PHGDH-213ENST00000641272 MSRAQ9UJ68 235 aa19.52■□□□□ 0.72
PHGDH-213ENST00000641272 RBAK-RBAKDNI3L0D1 243 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 NKRFO15226 690 aaKnown RBP eCLIP19.51■□□□□ 0.71
PHGDH-213ENST00000641272 PARP1P09874 1014 aaKnown RBP19.51■□□□□ 0.71
PHGDH-213ENST00000641272 EIF2AK2P19525 551 aaKnown RBP19.51■□□□□ 0.71
PHGDH-213ENST00000641272 PDE4AP27815 886 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 TTLL4Q14679 1199 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 RAB30Q15771 203 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 BRDTQ58F21 947 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-213ENST00000641272 SEPT14Q6ZU15 432 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 CHST3Q7LGC8 479 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 STAG2Q8N3U4 1231 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 SYTL5Q8TDW5 730 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-213ENST00000641272 VWCEQ96DN2 955 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 SEZ6LQ9BYH1 1024 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 MYO9BQ13459 2157 aa19.51■□□□□ 0.71
PHGDH-213ENST00000641272 MYOGP15173 224 aa19.5■□□□□ 0.71
PHGDH-213ENST00000641272 LY6KQ17RY6 165 aa19.5■□□□□ 0.71
PHGDH-213ENST00000641272 CCDC178Q5BJE1 867 aa19.5■□□□□ 0.71
PHGDH-213ENST00000641272 IFIT1BQ5T764 474 aaKnown RBP19.5■□□□□ 0.71
PHGDH-213ENST00000641272 FBXO11Q86XK2 927 aa19.5■□□□□ 0.71
PHGDH-213ENST00000641272 AFG1LQ8WV93 481 aa19.5■□□□□ 0.71
PHGDH-213ENST00000641272 KRT23Q9C075 422 aa19.5■□□□□ 0.71
PHGDH-213ENST00000641272 JMJD4Q9H9V9 463 aa19.5■□□□□ 0.71
PHGDH-213ENST00000641272 B4DLN1 442 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 CFBP00751 764 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 MMP3P08254 477 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 SUPT20HL2P0C7V6 817 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 MRPL12P52815 198 aaKnown RBP19.49■□□□□ 0.71
PHGDH-213ENST00000641272 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-213ENST00000641272 CYB5R4Q7L1T6 521 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 ANKS1AQ92625 1134 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 CTNNA3Q9UI47 895 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 NOD1Q9Y239 953 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 SLC4A7Q9Y6M7 1214 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 CHD9Q3L8U1 2897 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 PTPRSQ13332 1948 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 VCANP13611 3396 aa19.49■□□□□ 0.71
PHGDH-213ENST00000641272 A6NJR5 290 aa19.48■□□□□ 0.71
PHGDH-213ENST00000641272 SORBS3O60504 671 aa19.48■□□□□ 0.71
PHGDH-213ENST00000641272 IGFBP4P22692 258 aa19.48■□□□□ 0.71
PHGDH-213ENST00000641272 ADGRE1Q14246 886 aa19.48■□□□□ 0.71
PHGDH-213ENST00000641272 TTC22Q5TAA0 569 aa19.48■□□□□ 0.71
PHGDH-213ENST00000641272 RMDN3Q96TC7 470 aa19.48■□□□□ 0.71
PHGDH-213ENST00000641272 CNNM2Q9H8M5 875 aa19.48■□□□□ 0.71
PHGDH-213ENST00000641272 SLC28A3Q9HAS3 691 aa19.48■□□□□ 0.71
PHGDH-213ENST00000641272 TRIP12Q14669 1992 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-213ENST00000641272 PPP1R11O60927 126 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-213ENST00000641272 GH1P01241 217 aa19.47■□□□□ 0.71
PHGDH-213ENST00000641272 ATP2A2P16615 1042 aaKnown RBP19.47■□□□□ 0.71
PHGDH-213ENST00000641272 ARHGAP1Q07960 439 aa19.47■□□□□ 0.71
PHGDH-213ENST00000641272 CCDC85BQ15834 202 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-213ENST00000641272 ARHGEF16Q5VV41 709 aa19.47■□□□□ 0.71
PHGDH-213ENST00000641272 PPP2R2DQ66LE6 453 aa19.47■□□□□ 0.71
PHGDH-213ENST00000641272 CCDC62Q6P9F0 684 aa19.47■□□□□ 0.71
PHGDH-213ENST00000641272 HOMER1Q86YM7 354 aa19.47■□□□□ 0.71
PHGDH-213ENST00000641272 RPUSD2Q8IZ73 545 aaKnown RBP19.47■□□□□ 0.71
PHGDH-213ENST00000641272 RGS22Q8NE09 1264 aa19.47■□□□□ 0.71
PHGDH-213ENST00000641272 NSUN6Q8TEA1 469 aaKnown RBP19.47■□□□□ 0.71
PHGDH-213ENST00000641272 MRPL11Q9Y3B7 192 aaKnown RBP19.47■□□□□ 0.71
PHGDH-213ENST00000641272 MYH7BA7E2Y1 1941 aa19.47■□□□□ 0.71
PHGDH-213ENST00000641272 TET1Q8NFU7 2136 aa19.46■□□□□ 0.71
PHGDH-213ENST00000641272 COL4A4P53420 1690 aaPredicted RBP19.46■□□□□ 0.71
PHGDH-213ENST00000641272 OPLAHO14841 1288 aa19.46■□□□□ 0.71
PHGDH-213ENST00000641272 NT5C2P49902 561 aa19.46■□□□□ 0.71
PHGDH-213ENST00000641272 SEC23AQ15436 765 aa19.46■□□□□ 0.71
PHGDH-213ENST00000641272 STXBP2Q15833 593 aa19.46■□□□□ 0.71
PHGDH-213ENST00000641272 NFRKBQ6P4R8 1299 aa19.46■□□□□ 0.71
PHGDH-213ENST00000641272 MCF2L2Q86YR7 1114 aa19.46■□□□□ 0.71
PHGDH-213ENST00000641272 PXMP2Q9NR77 195 aa19.46■□□□□ 0.71
PHGDH-213ENST00000641272 TAF6LQ9Y6J9 622 aa19.46■□□□□ 0.71
PHGDH-213ENST00000641272 KLRF2D3W0D1 207 aa19.45■□□□□ 0.7
PHGDH-213ENST00000641272 ZNF286BP0CG31 522 aa19.45■□□□□ 0.7
PHGDH-213ENST00000641272 HOXA13P31271 388 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-213ENST00000641272 MICALL1Q8N3F8 863 aa19.45■□□□□ 0.7
PHGDH-213ENST00000641272 ZFP91Q96JP5 570 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms