RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 PPP1R14BQ96C90 147 aa8.82□□□□□ -1
RTTN-223ENST00000640931 DUSP9Q99956 384 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 MAK16Q9BXY0 300 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 ACTR5Q9H9F9 607 aaPredicted RBP8.82□□□□□ -1
RTTN-223ENST00000640931 EBF2Q9HAK2 575 aa8.82□□□□□ -1
RTTN-223ENST00000640931 SLC40A1Q9NP59 571 aa8.82□□□□□ -1
RTTN-223ENST00000640931 EXOC1Q9NV70 894 aa8.82□□□□□ -1
RTTN-223ENST00000640931 TAF1LQ8IZX4 1826 aa8.82□□□□□ -1
RTTN-223ENST00000640931 C4AP0C0L4 1744 aa8.82□□□□□ -1
RTTN-223ENST00000640931 GOLGA8BA8MQT2 603 aa8.82□□□□□ -1
RTTN-223ENST00000640931 TMEM232C9JQI7 657 aa8.82□□□□□ -1
RTTN-223ENST00000640931 LUC7L3O95232 432 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 RPSAP08865 295 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 PARP1P09874 1014 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 PRDX5P30044 214 aa8.82□□□□□ -1
RTTN-223ENST00000640931 CDC27P30260 824 aa8.82□□□□□ -1
RTTN-223ENST00000640931 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 AARSP49588 968 aaKnown RBP eCLIP8.82□□□□□ -1
RTTN-223ENST00000640931 PHEXP78562 749 aa8.82□□□□□ -1
RTTN-223ENST00000640931 TMEM62Q0P6H9 643 aa8.82□□□□□ -1
RTTN-223ENST00000640931 MAP3K12Q12852 859 aa8.82□□□□□ -1
RTTN-223ENST00000640931 GIMAP6Q6P9H5 292 aa8.82□□□□□ -1
RTTN-223ENST00000640931 VPS37DQ86XT2 251 aa8.82□□□□□ -1
RTTN-223ENST00000640931 PEX5LQ8IYB4 626 aa8.82□□□□□ -1
RTTN-223ENST00000640931 CEP57L1Q8IYX8 460 aa8.82□□□□□ -1
RTTN-223ENST00000640931 WHAMMQ8TF30 809 aa8.82□□□□□ -1
RTTN-223ENST00000640931 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.82□□□□□ -1
RTTN-223ENST00000640931 AGXT2Q9BYV1 514 aa8.82□□□□□ -1
RTTN-223ENST00000640931 NAT10Q9H0A0 1025 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 VIPAS39Q9H9C1 493 aa8.82□□□□□ -1
RTTN-223ENST00000640931 GGA2Q9UJY4 613 aa8.82□□□□□ -1
RTTN-223ENST00000640931 RAB21Q9UL25 225 aa8.82□□□□□ -1
RTTN-223ENST00000640931 PAIP2BQ9ULR5 123 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 TPX2Q9ULW0 747 aaKnown RBP8.82□□□□□ -1
RTTN-223ENST00000640931 L1RE1Q9UN81 338 aa8.82□□□□□ -1
RTTN-223ENST00000640931 TMED5Q9Y3A6 229 aa8.82□□□□□ -1
RTTN-223ENST00000640931 BRWD3Q6RI45 1802 aa8.82□□□□□ -1
RTTN-223ENST00000640931 MINDY4BA8MYZ0 360 aa8.81□□□□□ -1
RTTN-223ENST00000640931 EIF3FO00303 357 aaPredicted RBP8.81□□□□□ -1
RTTN-223ENST00000640931 PPP1R12BO60237 982 aaPredicted RBP8.81□□□□□ -1
RTTN-223ENST00000640931 PRDM1O75626 825 aa8.81□□□□□ -1
RTTN-223ENST00000640931 STK10O94804 968 aaKnown RBP8.81□□□□□ -1
RTTN-223ENST00000640931 LINGO3P0C6S8 592 aa8.81□□□□□ -1
RTTN-223ENST00000640931 CYP2D6P10635 497 aa8.81□□□□□ -1
RTTN-223ENST00000640931 CNGA1P29973 690 aa8.81□□□□□ -1
RTTN-223ENST00000640931 BLMHQ13867 455 aa8.81□□□□□ -1
RTTN-223ENST00000640931 TBC1D10BQ4KMP7 808 aaPredicted RBP8.81□□□□□ -1
RTTN-223ENST00000640931 MSL1Q68DK7 614 aa8.81□□□□□ -1
RTTN-223ENST00000640931 FAAH2Q6GMR7 532 aa8.81□□□□□ -1
RTTN-223ENST00000640931 FBXO33Q7Z6M2 555 aa8.81□□□□□ -1
RTTN-223ENST00000640931 NCOA7Q8NI08 942 aa8.81□□□□□ -1
RTTN-223ENST00000640931 NAPBQ9H115 298 aa8.81□□□□□ -1
RTTN-223ENST00000640931 PCDH18Q9HCL0 1135 aa8.81□□□□□ -1
RTTN-223ENST00000640931 ZNHIT6Q9NWK9 470 aaKnown RBP8.81□□□□□ -1
RTTN-223ENST00000640931 UBAP1Q9NZ09 502 aa8.81□□□□□ -1
RTTN-223ENST00000640931 MYO1AQ9UBC5 1043 aa8.81□□□□□ -1
RTTN-223ENST00000640931 LY75O60449 1722 aa8.81□□□□□ -1
RTTN-223ENST00000640931 ZNF804BA4D1E1 1349 aa8.81□□□□□ -1
RTTN-223ENST00000640931 A0A1B0GUL6 1792 aa8.81□□□□□ -1
RTTN-223ENST00000640931 POTEMA6NI47 508 aa8.81□□□□□ -1
RTTN-223ENST00000640931 SH2B2O14492 632 aaPredicted RBP8.81□□□□□ -1
RTTN-223ENST00000640931 ABLIM1O14639 778 aa8.81□□□□□ -1
RTTN-223ENST00000640931 N4BP1O75113 896 aaKnown RBP8.81□□□□□ -1
RTTN-223ENST00000640931 SMIM24O75264 130 aa8.81□□□□□ -1
RTTN-223ENST00000640931 SERPINB2P05120 415 aa8.81□□□□□ -1
RTTN-223ENST00000640931 USP11P51784 963 aa8.81□□□□□ -1
RTTN-223ENST00000640931 NEK2P51955 445 aa8.81□□□□□ -1
RTTN-223ENST00000640931 GPSM2P81274 684 aa8.81□□□□□ -1
RTTN-223ENST00000640931 GNL2Q13823 731 aaKnown RBP8.81□□□□□ -1
RTTN-223ENST00000640931 PABPC1LQ4VXU2 614 aaKnown RBP8.81□□□□□ -1
RTTN-223ENST00000640931 RALYLQ86SE5 291 aaKnown RBP8.81□□□□□ -1
RTTN-223ENST00000640931 FAM228AQ86W67 206 aa8.81□□□□□ -1
RTTN-223ENST00000640931 ANKRD13AQ8IZ07 590 aa8.81□□□□□ -1
RTTN-223ENST00000640931 ZBTB8BQ8NAP8 495 aaPredicted RBP8.81□□□□□ -1
RTTN-223ENST00000640931 PHKBQ93100 1093 aa8.81□□□□□ -1
RTTN-223ENST00000640931 PGBD1Q96JS3 809 aa8.81□□□□□ -1
RTTN-223ENST00000640931 NYXQ9GZU5 481 aa8.81□□□□□ -1
RTTN-223ENST00000640931 CENPHQ9H3R5 247 aa8.81□□□□□ -1
RTTN-223ENST00000640931 ZSWIM5Q9P217 1185 aa8.81□□□□□ -1
RTTN-223ENST00000640931 ATXN10Q9UBB4 475 aa8.81□□□□□ -1
RTTN-223ENST00000640931 CROTQ9UKG9 612 aa8.81□□□□□ -1
RTTN-223ENST00000640931 TMCO1Q9UM00 188 aa8.81□□□□□ -1
RTTN-223ENST00000640931 CTDP1Q9Y5B0 961 aaPredicted RBP8.81□□□□□ -1
RTTN-223ENST00000640931 A0A087WWV3 80 aa8.8□□□□□ -1
RTTN-223ENST00000640931 UNCXA6NJT0 531 aa8.8□□□□□ -1
RTTN-223ENST00000640931 KIF28PB7ZC32 967 aa8.8□□□□□ -1
RTTN-223ENST00000640931 H3BQV1 296 aa8.8□□□□□ -1
RTTN-223ENST00000640931 RNF40O75150 1001 aa8.8□□□□□ -1
RTTN-223ENST00000640931 PRPF6O94906 941 aaKnown RBP8.8□□□□□ -1
RTTN-223ENST00000640931 ALOX15P16050 662 aaPredicted RBP8.8□□□□□ -1
RTTN-223ENST00000640931 HOXD10P28358 340 aa8.8□□□□□ -1
RTTN-223ENST00000640931 IRAK1P51617 712 aa8.8□□□□□ -1
RTTN-223ENST00000640931 MCCD1P59942 119 aaPredicted RBP8.8□□□□□ -1
RTTN-223ENST00000640931 MECOMQ03112 1051 aa8.8□□□□□ -1
RTTN-223ENST00000640931 PTK7Q13308 1070 aa8.8□□□□□ -1
RTTN-223ENST00000640931 UBE4AQ14139 1066 aa8.8□□□□□ -1
RTTN-223ENST00000640931 CAMK4Q16566 473 aa8.8□□□□□ -1
RTTN-223ENST00000640931 TXNRD1Q16881 649 aa8.8□□□□□ -1
RTTN-223ENST00000640931 CYB5D1Q6P9G0 228 aa8.8□□□□□ -1
RTTN-223ENST00000640931 MICU3Q86XE3 530 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms