RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 ZNF827Q17R98 1081 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 FRA10AC1Q70Z53 315 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 KIFC3Q9BVG8 833 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 ATG3Q9NT62 314 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 NIP7Q9Y221 180 aaKnown RBP eCLIP9□□□□□ -0.97
NECAP1-227ENST00000640648 DIS3Q9Y2L1 958 aaKnown RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 NOC2LQ9Y3T9 749 aaKnown RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 TLDC2A0PJX2 215 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 I3L4J1 428 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 TXNDC9O14530 226 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 PDE5AO76074 875 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 BAG3O95817 575 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 KCNA4P22459 653 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 ZAP70P43403 619 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 AP2B1P63010 937 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 PPP2R2AP63151 447 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 PTPN21Q16825 1174 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 KDM7AQ6ZMT4 941 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 ANO5Q75V66 913 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 SYCP3Q8IZU3 236 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 ZKSCAN4Q969J2 545 aaPredicted RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 ZNF711Q9Y462 761 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 GRID2IPA4D2P6 1211 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 CCDC188H7C350 402 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 AARSP49588 968 aaKnown RBP eCLIP9□□□□□ -0.97
NECAP1-227ENST00000640648 FAM133BQ5BKY9 247 aaKnown RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 TMEM154Q6P9G4 183 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 PLBD2Q8NHP8 589 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 CFAP61Q8NHU2 1237 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 EZH1Q92800 747 aaPredicted RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 MCM9Q9NXL9 1143 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 GMEB1Q9Y692 573 aa9□□□□□ -0.97
NECAP1-227ENST00000640648 V9GY48 417 aaPredicted RBP9□□□□□ -0.97
NECAP1-227ENST00000640648 PFKFB1P16118 471 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 CMA1P23946 247 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 KRT9P35527 623 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 MLH1P40692 756 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 TBC1D1Q86TI0 1168 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 SIRT1Q96EB6 747 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 PBKQ96KB5 322 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 FAM81BQ96LP2 452 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 ORAI2Q96SN7 254 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 CARD9Q9H257 536 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 PACSIN2Q9UNF0 486 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 NEURL1BA8MQ27 555 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 ADD1P35611 737 aaKnown RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 VHLP40337 213 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 CTDSPL2Q05D32 466 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 RPS6KA1Q15418 735 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 PROSER3Q2NL68 480 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 TMCO5AQ8N6Q1 288 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 SMCR8Q8TEV9 937 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 TBC1D5Q92609 795 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 CCT8L2Q96SF2 557 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 MMADHCQ9H3L0 296 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 MRPL40Q9NQ50 206 aaKnown RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 GID8Q9NWU2 228 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 SH3GLB1Q9Y371 365 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 ATP6V0A2Q9Y487 856 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 BIRC5O15392 142 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 ITGA6P23229 1130 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 C10orf76Q5T2E6 689 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 SEL1L2Q5TEA6 688 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 C16orf87Q6PH81 154 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 DTHD1Q6ZMT9 781 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 TSNARE1Q96NA8 513 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 PSMB7Q99436 277 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 EFHD1Q9BUP0 239 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 DIABLOQ9NR28 239 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 TAB2Q9NYJ8 693 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 PCDHA7Q9UN72 937 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 EPN1Q9Y6I3 576 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 HSPA13P48723 471 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 TBC1D8BQ0IIM8 1120 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 ZC3H18Q86VM9 953 aaKnown RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 CMTR1Q8N1G2 835 aaKnown RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 NR1H4Q96RI1 486 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 ZNF219Q9P2Y4 722 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 SYNRGQ9UMZ2 1314 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 PRDM15P57071 1507 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-227ENST00000640648 PLXNC1O60486 1568 aa8.99□□□□□ -0.97
NECAP1-227ENST00000640648 CHD1O14646 1710 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 NVLO15381 856 aaKnown RBP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 SPAG7O75391 227 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 LDHCP07864 332 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 GGCXP38435 758 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 NDUFA8P51970 172 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 RNASE9P60153 205 aaKnown RBP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 RIPK1Q13546 671 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 POSTNQ15063 836 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 TEDDM1Q5T9Z0 273 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 PIK3AP1Q6ZUJ8 805 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 ZNF589Q86UQ0 364 aaPredicted RBP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 CEP70Q8NHQ1 597 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 TMEM87BQ96K49 555 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 SLF1Q9BQI6 1058 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 FERMT1Q9BQL6 677 aa8.98□□□□□ -0.97
NECAP1-227ENST00000640648 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.98□□□□□ -0.97
NECAP1-227ENST00000640648 ARHGEF5Q12774 1597 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms