RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 PCDHA6Q9UN73 950 aa24.69■■□□□ 1.54
TSPAN9-208ENST00000640568 PCDHA8Q9Y5H6 950 aa24.69■■□□□ 1.54
TSPAN9-208ENST00000640568 MCM3APO60318 1980 aa24.68■■□□□ 1.54
TSPAN9-208ENST00000640568 VPS37CA5D8V6 355 aaPredicted RBP24.68■■□□□ 1.54
TSPAN9-208ENST00000640568 B4DLN1 442 aa24.68■■□□□ 1.54
TSPAN9-208ENST00000640568 CLK2P49760 499 aaKnown RBP24.68■■□□□ 1.54
TSPAN9-208ENST00000640568 ALDH5A1P51649 535 aaPredicted RBP24.68■■□□□ 1.54
TSPAN9-208ENST00000640568 NPLOC4Q8TAT6 608 aa24.68■■□□□ 1.54
TSPAN9-208ENST00000640568 NSUN6Q8TEA1 469 aaKnown RBP24.68■■□□□ 1.54
TSPAN9-208ENST00000640568 PURBQ96QR8 312 aaKnown RBP24.68■■□□□ 1.54
TSPAN9-208ENST00000640568 ANO3Q9BYT9 981 aa24.68■■□□□ 1.54
TSPAN9-208ENST00000640568 MYH7BA7E2Y1 1941 aa24.67■■□□□ 1.54
TSPAN9-208ENST00000640568 HOXC6P09630 235 aa24.67■■□□□ 1.54
TSPAN9-208ENST00000640568 SYT1P21579 422 aa24.67■■□□□ 1.54
TSPAN9-208ENST00000640568 MCTP1Q6DN14 999 aa24.67■■□□□ 1.54
TSPAN9-208ENST00000640568 MAML3Q96JK9 1138 aa24.67■■□□□ 1.54
TSPAN9-208ENST00000640568 PGBD1Q96JS3 809 aa24.67■■□□□ 1.54
TSPAN9-208ENST00000640568 CCDC194A0A1B0GVG4 234 aa24.66■■□□□ 1.54
TSPAN9-208ENST00000640568 SOWAHBA6NEL2 793 aa24.66■■□□□ 1.54
TSPAN9-208ENST00000640568 XRCC5P13010 732 aaKnown RBP24.66■■□□□ 1.54
TSPAN9-208ENST00000640568 EIF2AK2P19525 551 aaKnown RBP24.66■■□□□ 1.54
TSPAN9-208ENST00000640568 NPY5RQ15761 445 aa24.66■■□□□ 1.54
TSPAN9-208ENST00000640568 PXMP2Q9NR77 195 aa24.66■■□□□ 1.54
TSPAN9-208ENST00000640568 ASB14A6NK59 587 aa24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 BTBD18B2RXH4 712 aa24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 ADAMTS3O15072 1205 aa24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 PDIA4P13667 645 aaKnown RBP24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 IRF5Q13568 498 aa24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 KRT25Q7Z3Z0 450 aa24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 CTU1Q7Z7A3 348 aaKnown RBP24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 ZNF467Q7Z7K2 595 aaPredicted RBP24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 TRMT44Q8IYL2 757 aaKnown RBP24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 OXER1Q8TDS5 423 aa24.65■■□□□ 1.54
TSPAN9-208ENST00000640568 STX6O43752 255 aa24.64■■□□□ 1.54
TSPAN9-208ENST00000640568 NR5A1Q13285 461 aa24.64■■□□□ 1.54
TSPAN9-208ENST00000640568 FOXP1Q9H334 677 aaPredicted RBP24.64■■□□□ 1.54
TSPAN9-208ENST00000640568 LOC102724159A0A0B4J2E5 919 aa24.64■■□□□ 1.53
TSPAN9-208ENST00000640568 M0R2N6 131 aa24.64■■□□□ 1.53
TSPAN9-208ENST00000640568 UBXN2AP68543 259 aa24.64■■□□□ 1.53
TSPAN9-208ENST00000640568 NONOQ15233 471 aaKnown RBP eCLIP24.64■■□□□ 1.53
TSPAN9-208ENST00000640568 PWP2Q15269 919 aaKnown RBP24.64■■□□□ 1.53
TSPAN9-208ENST00000640568 FGD4Q96M96 766 aa24.64■■□□□ 1.53
TSPAN9-208ENST00000640568 IWS1Q96ST2 819 aa24.64■■□□□ 1.53
TSPAN9-208ENST00000640568 PRDM10Q9NQV6 1147 aa24.64■■□□□ 1.53
TSPAN9-208ENST00000640568 PDE4DQ08499 809 aa24.63■■□□□ 1.53
TSPAN9-208ENST00000640568 PGM5Q15124 567 aa24.63■■□□□ 1.53
TSPAN9-208ENST00000640568 PIK3AP1Q6ZUJ8 805 aa24.63■■□□□ 1.53
TSPAN9-208ENST00000640568 MSL3Q8N5Y2 521 aaKnown RBP24.63■■□□□ 1.53
TSPAN9-208ENST00000640568 PDCD2LQ9BRP1 358 aa24.63■■□□□ 1.53
TSPAN9-208ENST00000640568 LRRC37A2A6NM11 1700 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 FRMPD4Q14CM0 1322 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 RPTORQ8N122 1335 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 ADCY3O60266 1144 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 MYCLP12524 364 aaPredicted RBP24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 CCND2P30279 289 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 CCL14Q16627 93 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 OLFML2BQ68BL8 750 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 ARMCX2Q7L311 632 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 TINF2Q9BSI4 451 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 PTPN22Q9Y2R2 807 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 PTCH2Q9Y6C5 1203 aa24.62■■□□□ 1.53
TSPAN9-208ENST00000640568 ASTN1O14525 1302 aa24.61■■□□□ 1.53
TSPAN9-208ENST00000640568 SYNGAP1Q96PV0 1343 aa24.61■■□□□ 1.53
TSPAN9-208ENST00000640568 NR3C2P08235 984 aa24.61■■□□□ 1.53
TSPAN9-208ENST00000640568 MFSD14CQ5VZR4 134 aa24.61■■□□□ 1.53
TSPAN9-208ENST00000640568 SLAIN1Q8ND83 568 aa24.61■■□□□ 1.53
TSPAN9-208ENST00000640568 IPO9Q96P70 1041 aaKnown RBP24.61■■□□□ 1.53
TSPAN9-208ENST00000640568 KIAA1217Q5T5P2 1943 aa24.6■■□□□ 1.53
TSPAN9-208ENST00000640568 SREBF1P36956 1147 aa24.6■■□□□ 1.53
TSPAN9-208ENST00000640568 STXBP2Q15833 593 aa24.6■■□□□ 1.53
TSPAN9-208ENST00000640568 MAMDC4Q6UXC1 1216 aa24.6■■□□□ 1.53
TSPAN9-208ENST00000640568 PXYLP1Q8TE99 480 aa24.6■■□□□ 1.53
TSPAN9-208ENST00000640568 TBCKQ8TEA7 893 aa24.6■■□□□ 1.53
TSPAN9-208ENST00000640568 TRIB2Q92519 343 aa24.6■■□□□ 1.53
TSPAN9-208ENST00000640568 FLRT1Q9NZU1 646 aa24.6■■□□□ 1.53
TSPAN9-208ENST00000640568 ZNF76P36508 570 aa24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 ARHGAP4P98171 946 aa24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 PKN2Q16513 984 aaKnown RBP24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 INF2Q27J81 1249 aa24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 PCNX4Q63HM2 1172 aa24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 NOSTRINQ8IVI9 506 aa24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 TNFRSF25Q93038 417 aa24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 MTMR6Q9Y217 621 aa24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 CNPY2Q9Y2B0 182 aa24.59■■□□□ 1.53
TSPAN9-208ENST00000640568 KIF28PB7ZC32 967 aa24.58■■□□□ 1.53
TSPAN9-208ENST00000640568 ELNP15502 786 aa24.58■■□□□ 1.53
TSPAN9-208ENST00000640568 EDNRBP24530 442 aa24.58■■□□□ 1.53
TSPAN9-208ENST00000640568 U2AF2P26368 475 aaKnown RBP eCLIP24.58■■□□□ 1.53
TSPAN9-208ENST00000640568 GRK4P32298 578 aa24.58■■□□□ 1.53
TSPAN9-208ENST00000640568 XRRA1Q6P2D8 792 aa24.58■■□□□ 1.53
TSPAN9-208ENST00000640568 IL31RAQ8NI17 732 aa24.58■■□□□ 1.53
TSPAN9-208ENST00000640568 NOL7Q9UMY1 257 aaKnown RBP24.58■■□□□ 1.53
TSPAN9-208ENST00000640568 HMGCRP04035 888 aa24.58■■□□□ 1.52
TSPAN9-208ENST00000640568 NEK8Q86SG6 692 aa24.58■■□□□ 1.52
TSPAN9-208ENST00000640568 FERMT3Q86UX7 667 aa24.58■■□□□ 1.52
TSPAN9-208ENST00000640568 DDX49Q9Y6V7 483 aaKnown RBP24.58■■□□□ 1.52
TSPAN9-208ENST00000640568 STAM2O75886 525 aa24.57■■□□□ 1.52
TSPAN9-208ENST00000640568 CYP2C19P33261 490 aa24.57■■□□□ 1.52
TSPAN9-208ENST00000640568 EARS2Q5JPH6 523 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms