RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 CALCRLQ16602 461 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 CCDC96Q2M329 555 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 CNNM4Q6P4Q7 775 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 EIF3CQ99613 913 aaKnown RBP15.54■□□□□ 0.08
SPIN3-239ENST00000640463 GBP3Q9H0R5 595 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 MMRN2Q9H8L6 949 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 DDX60LQ5H9U9 1706 aaKnown RBP15.54■□□□□ 0.08
SPIN3-239ENST00000640463 C2orf54Q08AI8 447 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 WDR93Q6P2C0 686 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 CCDC155Q8N6L0 562 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 MLXIPQ9HAP2 919 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 MAGEF1Q9HAY2 307 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 ZNF287Q9HBT7 754 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 GPCPD1Q9NPB8 672 aa15.54■□□□□ 0.08
SPIN3-239ENST00000640463 COL24A1Q17RW2 1714 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 EDIL3O43854 480 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 MFSD14BQ5SR56 506 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 KCNK18Q7Z418 384 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 PSMB7Q99436 277 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 GPR75-ASB3A0A0A6YYF3 556 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 KIF5AQ12840 1032 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 ZSCAN29Q8IWY8 852 aaPredicted RBP15.53■□□□□ 0.08
SPIN3-239ENST00000640463 CDK5RAP3Q96JB5 506 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 ERGIC2Q96RQ1 377 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 ARHGAP20Q9P2F6 1191 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 CAPN6Q9Y6Q1 641 aa15.53■□□□□ 0.08
SPIN3-239ENST00000640463 MYBL2P10244 700 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 RHBDL3P58872 404 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 UBE2SQ16763 222 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 VWA3BQ502W6 1294 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 HSP90B2PQ58FF3 399 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 CENPPQ6IPU0 288 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 CCDC170Q8IYT3 715 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 ANKRD13CQ8N6S4 541 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 RETREG2Q8NC44 543 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 SECISBP2LQ93073 1101 aaKnown RBP15.52■□□□□ 0.08
SPIN3-239ENST00000640463 NDST4Q9H3R1 872 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 PDHBP11177 359 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 CAPN2P17655 700 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 TNNI2P48788 182 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 RIN2Q8WYP3 895 aaPredicted RBP15.52■□□□□ 0.08
SPIN3-239ENST00000640463 LARP4BQ92615 738 aaKnown RBP15.52■□□□□ 0.08
SPIN3-239ENST00000640463 NGLY1Q96IV0 654 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 MTMR9Q96QG7 549 aa15.52■□□□□ 0.08
SPIN3-239ENST00000640463 EP400Q96L91 3159 aa15.52■□□□□ 0.07
SPIN3-239ENST00000640463 F8W031 263 aaPredicted RBP15.52■□□□□ 0.07
SPIN3-239ENST00000640463 MOCS3O95396 460 aa15.52■□□□□ 0.07
SPIN3-239ENST00000640463 EIF4A3P38919 411 aaKnown RBP15.52■□□□□ 0.07
SPIN3-239ENST00000640463 VAV2P52735 878 aa15.52■□□□□ 0.07
SPIN3-239ENST00000640463 SPA17Q15506 151 aa15.52■□□□□ 0.07
SPIN3-239ENST00000640463 EHBP1Q8NDI1 1231 aa15.52■□□□□ 0.07
SPIN3-239ENST00000640463 SNX29Q8TEQ0 813 aa15.52■□□□□ 0.07
SPIN3-239ENST00000640463 RPGRQ92834 1020 aaKnown RBP15.52■□□□□ 0.07
SPIN3-239ENST00000640463 SMARCAL1Q9NZC9 954 aa15.52■□□□□ 0.07
SPIN3-239ENST00000640463 IRX5P78411 483 aaPredicted RBP15.51■□□□□ 0.07
SPIN3-239ENST00000640463 RAD51AP2Q09MP3 1159 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 ECM1Q16610 540 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 TRAPPC3LQ5T215 181 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 RRAGAQ7L523 313 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 IFIH1Q9BYX4 1025 aaKnown RBP15.51■□□□□ 0.07
SPIN3-239ENST00000640463 DEF6Q9H4E7 631 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 SIK3Q9Y2K2 1263 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 SLURP2P0DP57 97 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 CXCR5P32302 372 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 MATR3P43243 847 aaKnown RBP eCLIP15.51■□□□□ 0.07
SPIN3-239ENST00000640463 EZH2Q15910 746 aaKnown RBP15.51■□□□□ 0.07
SPIN3-239ENST00000640463 FAM196AQ6ZSG2 479 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 EHD2Q9NZN4 543 aa15.51■□□□□ 0.07
SPIN3-239ENST00000640463 LRRC53A6NM62 1247 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 AKR1B1P15121 316 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 ADCY7P51828 1080 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 KIF11P52732 1056 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 UNC13DQ70J99 1090 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 COG1Q8WTW3 980 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 TANGO6Q9C0B7 1094 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 TBC1D7Q9P0N9 293 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 PCDHA13Q9Y5I0 950 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 RGL2O15211 777 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 PRR5LQ6MZQ0 368 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-239ENST00000640463 DDX12PQ92771 950 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 PURBQ96QR8 312 aaKnown RBP15.5■□□□□ 0.07
SPIN3-239ENST00000640463 RIOX1Q9H6W3 641 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 KANSL2Q9H9L4 492 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 PSD3Q9NYI0 1048 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 PLAGL2Q9UPG8 496 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 AKR1B10O60218 316 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 SSBP05455 408 aaKnown RBP eCLIP15.5■□□□□ 0.07
SPIN3-239ENST00000640463 CKAP4Q07065 602 aaKnown RBP15.5■□□□□ 0.07
SPIN3-239ENST00000640463 TTBK2Q6IQ55 1244 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 DPP8Q6V1X1 898 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-239ENST00000640463 ZNF662Q6ZS27 426 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 HDAC7Q8WUI4 952 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 FAM204AQ9H8W3 233 aa15.5■□□□□ 0.07
SPIN3-239ENST00000640463 BTAF1O14981 1849 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 A0A1W2PQJ5 194 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 NCK2O43639 380 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 TUBBP07437 444 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 SLC16A2P36021 539 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms