RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 FAM50BQ9Y247 325 aa13.64□□□□□ -0.23
MECP2-226ENST00000640414 TRIP12Q14669 1992 aaPredicted RBP13.63□□□□□ -0.23
MECP2-226ENST00000640414 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 IGKV6D-41A0A0C4DH26 115 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 GFRA3O60609 400 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 CHGBP05060 677 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 FDX1P10109 184 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 ALAS1P13196 640 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 TCF15Q12870 199 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 COL19A1Q14993 1142 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 HERC4Q5GLZ8 1057 aaPredicted RBP13.63□□□□□ -0.23
MECP2-226ENST00000640414 STK11IPQ8N1F8 1099 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 LRRC47Q8N1G4 583 aaKnown RBP13.63□□□□□ -0.23
MECP2-226ENST00000640414 MKL1Q969V6 931 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 WDR11Q9BZH6 1224 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 ECHDC1Q9NTX5 307 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 CYP39A1Q9NYL5 469 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 SLC4A4Q9Y6R1 1079 aa13.63□□□□□ -0.23
MECP2-226ENST00000640414 TECTAO75443 2155 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 ABHD14A-ACY1A0A1B0GW23 586 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 TMEM232C9JQI7 657 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 NBNO60934 754 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 CXCL10P02778 98 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 BMP3P12645 472 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 PTGISQ16647 500 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 TKFCQ3LXA3 575 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 TIGD5Q53EQ6 642 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 MUM1L1Q5H9M0 696 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 EP400NLQ6ZTU2 488 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 BANK1Q8NDB2 785 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 OR6J1Q8NGC5 347 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 CTAGE1Q96RT6 745 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 ARPP21Q9UBL0 812 aaPredicted RBP13.62□□□□□ -0.23
MECP2-226ENST00000640414 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
MECP2-226ENST00000640414 CACNA1AO00555 2505 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
MECP2-226ENST00000640414 SELPP16109 830 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 PTPROQ16827 1216 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 TCEAL5Q5H9L2 206 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 NSMFQ6X4W1 530 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 LRRC8DQ7L1W4 858 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 BMP8AQ7Z5Y6 402 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 RNF135Q8IUD6 432 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 CCDC155Q8N6L0 562 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 GMCL1P1Q8NEA9 526 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 PI4K2BQ8TCG2 481 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 EDAQ92838 391 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 MKNK2Q9HBH9 465 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 FAM86C1Q9NVL1 165 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 TTC41PQ6P2S7 1318 aa13.61□□□□□ -0.23
MECP2-226ENST00000640414 A6NJR5 290 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 KPNA6O60684 536 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 GSPT1P15170 499 aaKnown RBP13.6□□□□□ -0.23
MECP2-226ENST00000640414 ATP5JP18859 108 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 LTBRP36941 435 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 STAT2P52630 851 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 CHMP4BP1P59074 171 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 SMAD2Q15796 467 aaKnown RBP13.6□□□□□ -0.23
MECP2-226ENST00000640414 BRDTQ58F21 947 aaPredicted RBP13.6□□□□□ -0.23
MECP2-226ENST00000640414 TTC22Q5TAA0 569 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 KMT2EQ8IZD2 1858 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 DHX38Q92620 1227 aaKnown RBP13.6□□□□□ -0.23
MECP2-226ENST00000640414 PBXIP1Q96AQ6 731 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 CEP95Q96GE4 821 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 GPATCH3Q96I76 525 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 PRRX2Q99811 253 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 PAG1Q9NWQ8 432 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 CLDND1Q9NY35 253 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 MTMR4Q9NYA4 1195 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 ISY1Q9ULR0 285 aaKnown RBP13.6□□□□□ -0.23
MECP2-226ENST00000640414 SYNPO2Q9UMS6 1093 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 INSL6Q9Y581 213 aa13.6□□□□□ -0.23
MECP2-226ENST00000640414 CFAP54Q96N23 3096 aa13.59□□□□□ -0.23
MECP2-226ENST00000640414 ALDH5A1P51649 535 aaPredicted RBP13.59□□□□□ -0.23
MECP2-226ENST00000640414 SNAP25P60880 206 aa13.59□□□□□ -0.23
MECP2-226ENST00000640414 IKBKEQ14164 716 aa13.59□□□□□ -0.23
MECP2-226ENST00000640414 EPC2Q52LR7 807 aa13.59□□□□□ -0.23
MECP2-226ENST00000640414 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
MECP2-226ENST00000640414 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.59□□□□□ -0.237e-6■□□□□ 10.9
MECP2-226ENST00000640414 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
MECP2-226ENST00000640414 STAG1Q8WVM7 1258 aa13.59□□□□□ -0.23
MECP2-226ENST00000640414 COPS5Q92905 334 aa13.59□□□□□ -0.23
MECP2-226ENST00000640414 BOLA2Q9H3K6 86 aa13.59□□□□□ -0.23
MECP2-226ENST00000640414 NSUN3Q9H649 340 aaKnown RBP13.59□□□□□ -0.23
MECP2-226ENST00000640414 ALG13Q9NP73 1137 aaKnown RBP13.59□□□□□ -0.23
MECP2-226ENST00000640414 ZDBF2Q9HCK1 2354 aa13.59□□□□□ -0.23
MECP2-226ENST00000640414 RAD50Q92878 1312 aa13.59□□□□□ -0.23
MECP2-226ENST00000640414 TMEM221A6NGB7 291 aa13.58□□□□□ -0.24
MECP2-226ENST00000640414 H3BNC9 293 aa13.58□□□□□ -0.24
MECP2-226ENST00000640414 M0R296 226 aa13.58□□□□□ -0.24
MECP2-226ENST00000640414 EFCAB14O75071 495 aa13.58□□□□□ -0.24
MECP2-226ENST00000640414 PRDM1O75626 825 aa13.58□□□□□ -0.24
MECP2-226ENST00000640414 PARNO95453 639 aaKnown RBP13.58□□□□□ -0.24
MECP2-226ENST00000640414 TTLL1O95922 423 aa13.58□□□□□ -0.24
MECP2-226ENST00000640414 CKBP12277 381 aa13.58□□□□□ -0.24
MECP2-226ENST00000640414 HTRA4P83105 476 aaPredicted RBP13.58□□□□□ -0.24
MECP2-226ENST00000640414 RBL2Q08999 1139 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms