RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 AFAP1L1Q8TED9 768 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 RRP36Q96EU6 259 aaKnown RBP18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 TANGO6Q9C0B7 1094 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 KANSL2Q9H9L4 492 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 MED4Q9NPJ6 270 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 DMGDHQ9UI17 866 aaKnown RBP18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 ENOX2Q16206 610 aaKnown RBP18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 MAP9Q49MG5 647 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 TMC4Q7Z404 712 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 NEK8Q86SG6 692 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 AMIGO3Q86WK7 504 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 LRRC1Q9BTT6 524 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 NUP58Q9BVL2 599 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 MYMKA6NI61 221 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 BUB1O43683 1085 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 NAP1L1P55209 391 aaKnown RBP18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 SOGA3Q5TF21 947 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 COA7Q96BR5 231 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 EYA3Q99504 573 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 TUBBP07437 444 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 KIF11P52732 1056 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 DNAJC21Q5F1R6 531 aaKnown RBP18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 SND1Q7KZF4 910 aaKnown RBP eCLIP18.4■□□□□ 0.542e-20■□□□□ 8.1
HNRNPU-228ENST00000640306 CLEC10AQ8IUN9 316 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 CCDC170Q8IYT3 715 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 NOC3LQ8WTT2 800 aaKnown RBP18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 NUDT12Q9BQG2 462 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 ANKRD2Q9GZV1 360 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 PCDHA13Q9Y5I0 950 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 DLEC1Q9Y238 1755 aa18.4■□□□□ 0.54
HNRNPU-228ENST00000640306 TTC19Q6DKK2 380 aaPredicted RBP18.39■□□□□ 0.54
HNRNPU-228ENST00000640306 CCNI2Q6ZMN8 369 aaPredicted RBP18.39■□□□□ 0.54
HNRNPU-228ENST00000640306 FAM114A1Q8IWE2 563 aa18.39■□□□□ 0.54
HNRNPU-228ENST00000640306 CALML4Q96GE6 196 aa18.39■□□□□ 0.54
HNRNPU-228ENST00000640306 ZMYND12Q9H0C1 365 aa18.39■□□□□ 0.54
HNRNPU-228ENST00000640306 RASSF4Q9H2L5 321 aa18.39■□□□□ 0.54
HNRNPU-228ENST00000640306 NDST4Q9H3R1 872 aa18.39■□□□□ 0.54
HNRNPU-228ENST00000640306 NLRC4Q9NPP4 1024 aa18.39■□□□□ 0.54
HNRNPU-228ENST00000640306 SALL4Q9UJQ4 1053 aa18.39■□□□□ 0.54
HNRNPU-228ENST00000640306 SCN7AQ01118 1682 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 LRRC53A6NM62 1247 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 TDP2O95551 362 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 CDK5RAP3Q96JB5 506 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 C6orf50Q9HD87 102 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 TBC1D7Q9P0N9 293 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 SEC63Q9UGP8 760 aaKnown RBP18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 MYL1P05976 194 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 APBA1Q02410 837 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 GFPT1Q06210 699 aaPredicted RBP18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 SPTY2D1Q68D10 685 aaPredicted RBP18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 SV2BQ7L1I2 683 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 KRT25Q7Z3Z0 450 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 CREG2Q8IUH2 290 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 DAGLBQ8NCG7 672 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 C7orf25Q9BPX7 421 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 POLD4Q9HCU8 107 aa18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
HNRNPU-228ENST00000640306 ZC3H4Q9UPT8 1303 aaKnown RBP18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 MYH10P35580 1976 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 USP17L5A8MUK1 530 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 GNPATO15228 680 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 SLC37A4O43826 429 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 PRPF6O94906 941 aaKnown RBP18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 PRPHP41219 470 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 KCTD19Q17RG1 926 aaPredicted RBP18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 VWA3BQ502W6 1294 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 CNNM4Q6P4Q7 775 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 CEP95Q96GE4 821 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 EHD4Q9H223 541 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 SNX12Q9UMY4 172 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 AGPSO00116 658 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 USO1O60763 962 aaKnown RBP18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 TACC1O75410 805 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 SSBP05455 408 aaKnown RBP eCLIP18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 CDK8P49336 464 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 GRB10Q13322 594 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 TDRD12Q587J7 1177 aaKnown RBP18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 RETREG2Q8NC44 543 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 ERGIC2Q96RQ1 377 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 BLOC1S4Q9NUP1 217 aa18.38■□□□□ 0.53
HNRNPU-228ENST00000640306 LAD1O00515 517 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 BAG3O95817 575 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 IVLP07476 585 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 RASSF7Q02833 373 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 ARID5AQ03989 594 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 KCNK18Q7Z418 384 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 REXO1Q8N1G1 1221 aaKnown RBP18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 MS4A14Q96JA4 679 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 AK8Q96MA6 479 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 BTDP43251 543 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 RNASE9P60153 205 aaKnown RBP18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 AMPD3Q01432 767 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 SH2D4AQ9H788 454 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 PLAGL2Q9UPG8 496 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 THSD7AQ9UPZ6 1657 aa18.37■□□□□ 0.53
HNRNPU-228ENST00000640306 GOLGA6BA6NDN3 693 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 CALCRLQ16602 461 aa18.36■□□□□ 0.53
HNRNPU-228ENST00000640306 SLC10A5Q5PT55 438 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms