RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PWWP2AQ96N64 755 aa7.76□□□□□ -1.17
CCDC7-216ENST00000640058 MMP19Q99542 508 aa7.76□□□□□ -1.17
CCDC7-216ENST00000640058 TMEFF2Q9UIK5 374 aaPredicted RBP7.76□□□□□ -1.17
CCDC7-216ENST00000640058 NTRK1P04629 796 aa7.75□□□□□ -1.17
CCDC7-216ENST00000640058 FBLN1P23142 703 aa7.75□□□□□ -1.17
CCDC7-216ENST00000640058 EEPD1Q7L9B9 569 aa7.75□□□□□ -1.17
CCDC7-216ENST00000640058 IRS2Q9Y4H2 1338 aa7.75□□□□□ -1.17
CCDC7-216ENST00000640058 TRIM13O60858 407 aa7.74□□□□□ -1.17
CCDC7-216ENST00000640058 ASGR2P07307 311 aa7.74□□□□□ -1.17
CCDC7-216ENST00000640058 ATF2P15336 505 aa7.74□□□□□ -1.17
CCDC7-216ENST00000640058 IGFBP6P24592 240 aaPredicted RBP7.74□□□□□ -1.17
CCDC7-216ENST00000640058 PMLP29590 882 aa7.74□□□□□ -1.17
CCDC7-216ENST00000640058 TARBP2Q15633 366 aaKnown RBP7.74□□□□□ -1.17
CCDC7-216ENST00000640058 SLC10A6Q3KNW5 377 aa7.74□□□□□ -1.17
CCDC7-216ENST00000640058 NETO2Q8NC67 525 aa7.74□□□□□ -1.17
CCDC7-216ENST00000640058 ZCCHC4Q9H5U6 513 aa7.74□□□□□ -1.17
CCDC7-216ENST00000640058 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC7-216ENST00000640058 NUDT5Q9UKK9 219 aa7.74□□□□□ -1.17
CCDC7-216ENST00000640058 FAN1Q9Y2M0 1017 aa7.74□□□□□ -1.17
CCDC7-216ENST00000640058 MEFVO15553 781 aaPredicted RBP7.73□□□□□ -1.17
CCDC7-216ENST00000640058 FPR2P25090 351 aa7.73□□□□□ -1.17
CCDC7-216ENST00000640058 HOXC12P31275 282 aa7.73□□□□□ -1.17
CCDC7-216ENST00000640058 DDR2Q16832 855 aa7.73□□□□□ -1.17
CCDC7-216ENST00000640058 CCDC103Q8IW40 242 aa7.73□□□□□ -1.17
CCDC7-216ENST00000640058 PLEKHO2Q8TD55 490 aa7.73□□□□□ -1.17
CCDC7-216ENST00000640058 DIO2Q92813 273 aa7.73□□□□□ -1.17
CCDC7-216ENST00000640058 PEX11GQ96HA9 241 aa7.73□□□□□ -1.17
CCDC7-216ENST00000640058 GMLQ99445 158 aa7.73□□□□□ -1.17
CCDC7-216ENST00000640058 C22orf46C9J442 243 aa7.72□□□□□ -1.17
CCDC7-216ENST00000640058 ARNTLO00327 626 aa7.72□□□□□ -1.17
CCDC7-216ENST00000640058 GRIA2P42262 883 aa7.72□□□□□ -1.17
CCDC7-216ENST00000640058 FOXO4P98177 505 aa7.72□□□□□ -1.17
CCDC7-216ENST00000640058 TTLL10Q6ZVT0 673 aa7.72□□□□□ -1.17
CCDC7-216ENST00000640058 PPIL6Q8IXY8 311 aa7.72□□□□□ -1.17
CCDC7-216ENST00000640058 TMEM145Q8NBT3 493 aa7.72□□□□□ -1.17
CCDC7-216ENST00000640058 TSPAN17Q96FV3 270 aa7.72□□□□□ -1.17
CCDC7-216ENST00000640058 AGRPO00253 132 aa7.71□□□□□ -1.18
CCDC7-216ENST00000640058 KLF4O43474 513 aa7.71□□□□□ -1.18
CCDC7-216ENST00000640058 PLA2G1BP04054 148 aaKnown RBP7.71□□□□□ -1.18
CCDC7-216ENST00000640058 BCL6P41182 706 aa7.71□□□□□ -1.18
CCDC7-216ENST00000640058 GFRA1P56159 465 aa7.71□□□□□ -1.18
CCDC7-216ENST00000640058 RPL11P62913 178 aaKnown RBP7.71□□□□□ -1.18
CCDC7-216ENST00000640058 PPP2R2AP63151 447 aa7.71□□□□□ -1.18
CCDC7-216ENST00000640058 NAALADL2Q58DX5 795 aa7.71□□□□□ -1.18
CCDC7-216ENST00000640058 KREMEN2Q8NCW0 462 aa7.71□□□□□ -1.18
CCDC7-216ENST00000640058 FBXL7Q9UJT9 491 aa7.71□□□□□ -1.18
CCDC7-216ENST00000640058 TIMM13Q9Y5L4 95 aaPredicted RBP7.71□□□□□ -1.18
CCDC7-216ENST00000640058 PMF1-BGLAPU3KQ54 211 aa7.71□□□□□ -1.18
CCDC7-216ENST00000640058 NCAM1P13591 858 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 LCP1P13796 627 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 HOXA5P20719 270 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 ZC3H6P61129 1189 aaKnown RBP7.7□□□□□ -1.18
CCDC7-216ENST00000640058 KCNAB2Q13303 367 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 LCE1DQ5T752 114 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 E4F1Q66K89 784 aaPredicted RBP7.7□□□□□ -1.18
CCDC7-216ENST00000640058 IQCEQ6IPM2 695 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 CEP68Q76N32 757 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 NLRP10Q86W26 655 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 ADGRG2Q8IZP9 1017 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 MARCH10Q8NA82 808 aaPredicted RBP7.7□□□□□ -1.18
CCDC7-216ENST00000640058 RCBTB1Q8NDN9 531 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 KCNC2Q96PR1 638 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 RNF38Q9H0F5 515 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 PARD6AQ9NPB6 346 aa7.7□□□□□ -1.18
CCDC7-216ENST00000640058 A0A1W2PQU0 124 aa7.69□□□□□ -1.18
CCDC7-216ENST00000640058 MYO1BO43795 1136 aa7.69□□□□□ -1.18
CCDC7-216ENST00000640058 CPP00450 1065 aa7.69□□□□□ -1.18
CCDC7-216ENST00000640058 SCG5P05408 212 aa7.69□□□□□ -1.18
CCDC7-216ENST00000640058 DENND5AQ6IQ26 1287 aa7.69□□□□□ -1.18
CCDC7-216ENST00000640058 DCP2Q8IU60 420 aaKnown RBP7.69□□□□□ -1.18
CCDC7-216ENST00000640058 SMARCC2Q8TAQ2 1214 aa7.69□□□□□ -1.18
CCDC7-216ENST00000640058 CHAMP1Q96JM3 812 aa7.69□□□□□ -1.18
CCDC7-216ENST00000640058 EPN3Q9H201 632 aa7.69□□□□□ -1.18
CCDC7-216ENST00000640058 FFAR3O14843 346 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 STK10O94804 968 aaKnown RBP7.68□□□□□ -1.18
CCDC7-216ENST00000640058 SLC9A5Q14940 896 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 LILRA6Q6PI73 481 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 NLGN1Q8N2Q7 840 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 SYT8Q8NBV8 401 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 FEZF2Q8TBJ5 459 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 FNIP1Q8TF40 1166 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 TRMT2BQ96GJ1 504 aaKnown RBP7.68□□□□□ -1.18
CCDC7-216ENST00000640058 CCDC140Q96MF4 163 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 IER2Q9BTL4 223 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 TRIM55Q9BYV6 548 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 AP5M1Q9H0R1 490 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 PCDHA2Q9Y5H9 948 aa7.68□□□□□ -1.18
CCDC7-216ENST00000640058 A0A1B0GTL3 188 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 SGSM2O43147 1006 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 ZBTB7AO95365 584 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 LTBRP36941 435 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 RAB33AQ14088 237 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 ACBD5Q5T8D3 534 aaPredicted RBP7.67□□□□□ -1.18
CCDC7-216ENST00000640058 B3GNT8Q7Z7M8 397 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 ZDHHC14Q8IZN3 488 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 LINC01356Q8N9X3 169 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 TP53I13Q8NBR0 393 aaPredicted RBP7.67□□□□□ -1.18
CCDC7-216ENST00000640058 C1orf159Q96HA4 380 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 TMEM169Q96HH4 297 aa7.67□□□□□ -1.18
CCDC7-216ENST00000640058 NOX5Q96PH1 765 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms