RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 CCDC155Q8N6L0 562 aa17.15■□□□□ 0.34
TARDBP-231ENST00000639599 SCLYQ96I15 445 aa17.15■□□□□ 0.34
TARDBP-231ENST00000639599 DSCC1Q9BVC3 393 aa17.15■□□□□ 0.34
TARDBP-231ENST00000639599 NKX2-4Q9H2Z4 354 aa17.15■□□□□ 0.34
TARDBP-231ENST00000639599 MRPL11Q9Y3B7 192 aaKnown RBP17.15■□□□□ 0.34
TARDBP-231ENST00000639599 GRIN2DO15399 1336 aa17.15■□□□□ 0.34
TARDBP-231ENST00000639599 RBM47A0AV96 593 aaKnown RBP17.14■□□□□ 0.33
TARDBP-231ENST00000639599 CYP2C9P11712 490 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 TRDNQ13061 729 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 BFSP2Q13515 415 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 IFIT1BQ5T764 474 aaKnown RBP17.14■□□□□ 0.33
TARDBP-231ENST00000639599 ARHGEF16Q5VV41 709 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 PPP2R2DQ66LE6 453 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 SEPT14Q6ZU15 432 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 DEFB128Q7Z7B8 93 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 FBXO11Q86XK2 927 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 RGS22Q8NE09 1264 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 NSUN6Q8TEA1 469 aaKnown RBP17.14■□□□□ 0.33
TARDBP-231ENST00000639599 FTOQ9C0B1 505 aaKnown RBP eCLIP17.14■□□□□ 0.33
TARDBP-231ENST00000639599 MAF1Q9H063 256 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 VAT1LQ9HCJ6 419 aa17.14■□□□□ 0.33
TARDBP-231ENST00000639599 CXXC1Q9P0U4 656 aaPredicted RBP17.14■□□□□ 0.33
TARDBP-231ENST00000639599 ATP2A2P16615 1042 aaKnown RBP17.13■□□□□ 0.33
TARDBP-231ENST00000639599 EDNRBP24530 442 aa17.13■□□□□ 0.33
TARDBP-231ENST00000639599 RFC2P35250 354 aa17.13■□□□□ 0.33
TARDBP-231ENST00000639599 STXBP2Q15833 593 aa17.13■□□□□ 0.33
TARDBP-231ENST00000639599 NBPF20Q3BBV1 942 aa17.13■□□□□ 0.33
TARDBP-231ENST00000639599 NFRKBQ6P4R8 1299 aa17.13■□□□□ 0.33
TARDBP-231ENST00000639599 ADGRF4Q8IZF3 695 aa17.13■□□□□ 0.33
TARDBP-231ENST00000639599 WNT8AQ9H1J5 351 aa17.13■□□□□ 0.33
TARDBP-231ENST00000639599 TSPYL2Q9H2G4 693 aaPredicted RBP17.13■□□□□ 0.33
TARDBP-231ENST00000639599 CPVLQ9H3G5 476 aa17.13■□□□□ 0.33
TARDBP-231ENST00000639599 MCM3APO60318 1980 aa17.12■□□□□ 0.33
TARDBP-231ENST00000639599 ERICH2A1L162 156 aa17.12■□□□□ 0.33
TARDBP-231ENST00000639599 GH1P01241 217 aa17.12■□□□□ 0.33
TARDBP-231ENST00000639599 PTPN11Q06124 597 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-231ENST00000639599 TJAP1Q5JTD0 557 aa17.12■□□□□ 0.33
TARDBP-231ENST00000639599 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
TARDBP-231ENST00000639599 COPS5Q92905 334 aa17.12■□□□□ 0.33
TARDBP-231ENST00000639599 RMDN3Q96TC7 470 aa17.12■□□□□ 0.33
TARDBP-231ENST00000639599 COL6A3P12111 3177 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 LRRC37A2A6NM11 1700 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 CFBP00751 764 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 IGHDP01880 384 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
TARDBP-231ENST00000639599 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 MICALL1Q8N3F8 863 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 ENAHQ8N8S7 591 aaPredicted RBP17.11■□□□□ 0.33
TARDBP-231ENST00000639599 EXOC6Q8TAG9 804 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 SYTL5Q8TDW5 730 aaPredicted RBP17.11■□□□□ 0.33
TARDBP-231ENST00000639599 RUFY2Q8WXA3 655 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 IWS1Q96ST2 819 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 AMNQ9BXJ7 453 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 DNAH12Q6ZR08 3092 aa17.11■□□□□ 0.33
TARDBP-231ENST00000639599 A6NJR5 290 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 KIF28PB7ZC32 967 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
TARDBP-231ENST00000639599 RABGGTBP53611 331 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 TRAF1Q13077 416 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 CCDC85BQ15834 202 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-231ENST00000639599 TMEM67Q5HYA8 995 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 ANKS1AQ92625 1134 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 TAAR1Q96RJ0 339 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 KATNAL1Q9BW62 490 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 ZSWIM5Q9P217 1185 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 THEGQ9P2T0 379 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 PCDHA11Q9Y5I1 949 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 MRVI1Q9Y6F6 885 aa17.1■□□□□ 0.33
TARDBP-231ENST00000639599 PITPNM1O00562 1244 aa17.09■□□□□ 0.33
TARDBP-231ENST00000639599 MMP3P08254 477 aa17.09■□□□□ 0.33
TARDBP-231ENST00000639599 KCNJ6P48051 423 aa17.09■□□□□ 0.33
TARDBP-231ENST00000639599 SART3Q15020 963 aaKnown RBP17.09■□□□□ 0.33
TARDBP-231ENST00000639599 PTGISQ16647 500 aa17.09■□□□□ 0.33
TARDBP-231ENST00000639599 DGKDQ16760 1214 aa17.09■□□□□ 0.33
TARDBP-231ENST00000639599 LY6KQ17RY6 165 aa17.09■□□□□ 0.33
TARDBP-231ENST00000639599 RALYLQ86SE5 291 aaKnown RBP17.09■□□□□ 0.33
TARDBP-231ENST00000639599 AFG1LQ8WV93 481 aa17.09■□□□□ 0.33
TARDBP-231ENST00000639599 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
TARDBP-231ENST00000639599 YBX2Q9Y2T7 364 aaKnown RBP17.09■□□□□ 0.33
TARDBP-231ENST00000639599 GTPBP6O43824 516 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-231ENST00000639599 ARIH2O95376 493 aa17.08■□□□□ 0.32
TARDBP-231ENST00000639599 SKIV2LQ15477 1246 aaKnown RBP17.08■□□□□ 0.32
TARDBP-231ENST00000639599 C7orf31Q8N865 590 aa17.08■□□□□ 0.32
TARDBP-231ENST00000639599 USP38Q8NB14 1042 aa17.08■□□□□ 0.32
TARDBP-231ENST00000639599 CAGE1Q8TC20 777 aa17.08■□□□□ 0.32
TARDBP-231ENST00000639599 PPP1R13LQ8WUF5 828 aa17.08■□□□□ 0.32
TARDBP-231ENST00000639599 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-231ENST00000639599 KLRF2D3W0D1 207 aa17.07■□□□□ 0.32
TARDBP-231ENST00000639599 EIF3JO75822 258 aaKnown RBP17.07■□□□□ 0.32
TARDBP-231ENST00000639599 MYCLP12524 364 aaPredicted RBP17.07■□□□□ 0.32
TARDBP-231ENST00000639599 HOMER1Q86YM7 354 aa17.07■□□□□ 0.32
TARDBP-231ENST00000639599 DHX37Q8IY37 1157 aaKnown RBP17.07■□□□□ 0.32
TARDBP-231ENST00000639599 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
TARDBP-231ENST00000639599 JMJD4Q9H9V9 463 aa17.07■□□□□ 0.32
TARDBP-231ENST00000639599 ZBTB5O15062 677 aa17.06■□□□□ 0.32
TARDBP-231ENST00000639599 NR3C2P08235 984 aa17.06■□□□□ 0.32
TARDBP-231ENST00000639599 IQCF3P0C7M6 154 aa17.06■□□□□ 0.32
TARDBP-231ENST00000639599 LAMC2Q13753 1193 aa17.06■□□□□ 0.32
TARDBP-231ENST00000639599 KCNV1Q6PIU1 500 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms