RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 KRT79Q5XKE5 535 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 SLFN13Q68D06 897 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 TMEM179Q6ZVK1 233 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 ZSCAN29Q8IWY8 852 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-218ENST00000639595 RETREG2Q8NC44 543 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 KIAA0895Q8NCT3 520 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 GMCL1P1Q8NEA9 526 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 RAD54LQ92698 747 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 MBOAT7Q96N66 472 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 DNAJC7Q99615 494 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 MAGEC2Q9UBF1 373 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-218ENST00000639595 DDX25Q9UHL0 483 aaKnown RBP9.63□□□□□ -0.87
NECAP1-218ENST00000639595 CAPN11Q9UMQ6 739 aa9.63□□□□□ -0.87
NECAP1-218ENST00000639595 TADA3O75528 432 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 FCER1AP12319 257 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 H2AFXP16104 143 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-218ENST00000639595 CACNB3P54284 484 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 ATP2B2Q01814 1243 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 TCP10Q12799 353 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 ERCC6LQ2NKX8 1250 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 QRICH1Q2TAL8 776 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 MSL1Q68DK7 614 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 MCTP2Q6DN12 878 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 MOXD1Q6UVY6 613 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 FAM114A1Q8IWE2 563 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 LRRN4CLQ8ND94 238 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 OR8K1Q8NGG5 319 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 CRYGNQ8WXF5 182 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 GMCL1Q96IK5 515 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 NUP88Q99567 741 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-218ENST00000639595 NUDT12Q9BQG2 462 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 TUBGCP2Q9BSJ2 902 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 SYNPO2Q9UMS6 1093 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 TTC26A0AVF1 554 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 EFCAB8A8MWE9 144 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 PSMD2Q13200 908 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 MCM6Q14566 821 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 SEPT2Q15019 361 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 GUF1Q8N442 669 aaKnown RBP9.62□□□□□ -0.87
NECAP1-218ENST00000639595 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 TTYH3Q9C0H2 523 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 SEMA6BQ9H3T3 888 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 KCNMB3Q9NPA1 279 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.62□□□□□ -0.87
NECAP1-218ENST00000639595 PCDHA1Q9Y5I3 950 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 MRFAP1Q9Y605 127 aa9.62□□□□□ -0.87
NECAP1-218ENST00000639595 V9GYY5 206 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-218ENST00000639595 COL2A1P02458 1487 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-218ENST00000639595 POTEMA6NI47 508 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 F5H6K3 240 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 KLRC3Q07444 240 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 TUBB2AQ13885 445 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 FIGNQ5HY92 759 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 SNX29Q8TEQ0 813 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 CDK5RAP3Q96JB5 506 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 ERGIC2Q96RQ1 377 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 TUBB2BQ9BVA1 445 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 DDX41Q9UJV9 622 aaKnown RBP9.61□□□□□ -0.87
NECAP1-218ENST00000639595 PCDHA12Q9UN75 941 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 LUC7L2Q9Y383 392 aaKnown RBP9.61□□□□□ -0.87
NECAP1-218ENST00000639595 ABCB11O95342 1321 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 RASSF10A6NK89 507 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 MEIS2O14770 477 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 KIF5CO60282 957 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 MMP14P50281 582 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 RBM5P52756 815 aaKnown RBP eCLIP9.61□□□□□ -0.87
NECAP1-218ENST00000639595 ICA1Q05084 483 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 AP3B2Q13367 1082 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 ECM1Q16610 540 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 MEA1Q16626 185 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 SHROOM1Q2M3G4 852 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-218ENST00000639595 MIIPQ5JXC2 388 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 FBXO38Q6PIJ6 1188 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 BTNL9Q6UXG8 535 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 CREBRFQ8IUR6 639 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 TEX2Q8IWB9 1127 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 SUPT20HQ8NEM7 779 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 IQCDQ96DY2 449 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 OGFRQ9NZT2 677 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 MYO1AQ9UBC5 1043 aa9.61□□□□□ -0.87
NECAP1-218ENST00000639595 FAM196BA6NMK8 535 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L15C9J2P7 530 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L13C9JLJ4 530 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L11C9JVI0 530 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L18D6R9N7 530 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L22D6RA61 530 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L17D6RBQ6 530 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L19D6RCP7 530 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L20D6RJB6 530 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 CHRNA5P30532 468 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 ARHGAP25P42331 645 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L24Q0WX57 530 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 CDC37Q16543 378 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-218ENST00000639595 ABCB5Q2M3G0 1257 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 GRIPAP1Q4V328 841 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 USP17L6PQ6QN14 398 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 ZNF662Q6ZS27 426 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 KCNK18Q7Z418 384 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 UBXN4Q92575 508 aa9.6□□□□□ -0.87
NECAP1-218ENST00000639595 DDX12PQ92771 950 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms