RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 AGTPBP1Q9UPW5 1226 aa15.85■□□□□ 0.13
SCARB2-216ENST00000639300 STK36Q9NRP7 1315 aa15.85■□□□□ 0.13
SCARB2-216ENST00000639300 NRXN1Q9ULB1 1477 aa15.85■□□□□ 0.13
SCARB2-216ENST00000639300 TNS3Q68CZ2 1445 aa15.85■□□□□ 0.13
SCARB2-216ENST00000639300 WDR19Q8NEZ3 1342 aa15.85■□□□□ 0.13
SCARB2-216ENST00000639300 FDPSP14324 419 aaKnown RBP15.85■□□□□ 0.13
SCARB2-216ENST00000639300 EIF4A3P38919 411 aaKnown RBP15.85■□□□□ 0.13
SCARB2-216ENST00000639300 IQCB1Q15051 598 aa15.85■□□□□ 0.13
SCARB2-216ENST00000639300 USP49Q70CQ1 688 aa15.85■□□□□ 0.13
SCARB2-216ENST00000639300 DPF2Q92785 391 aa15.85■□□□□ 0.13
SCARB2-216ENST00000639300 PIK3C2BO00750 1634 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 ANTXR2P58335 489 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 ZBED6P86452 979 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 TTC31Q49AM3 519 aaPredicted RBP15.84■□□□□ 0.13
SCARB2-216ENST00000639300 USP17L5A8MUK1 530 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 DKC1O60832 514 aaKnown RBP eCLIP15.84■□□□□ 0.13
SCARB2-216ENST00000639300 MFAP3LO75121 409 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 CTDNEP1O95476 244 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 MRPS25P82663 173 aaKnown RBP15.84■□□□□ 0.13
SCARB2-216ENST00000639300 CCDC63Q8NA47 563 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 CD209Q9NNX6 404 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 NKIRAS1Q9NYS0 192 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 DLC1Q96QB1 1528 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 POTEMA6NI47 508 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 LIN9Q5TKA1 542 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 ZNF579Q8NAF0 562 aaKnown RBP15.84■□□□□ 0.13
SCARB2-216ENST00000639300 IGDCC4Q8TDY8 1250 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 NDST4Q9H3R1 872 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 PPANQ9NQ55 473 aaKnown RBP15.84■□□□□ 0.13
SCARB2-216ENST00000639300 STK17AQ9UEE5 414 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 SERPINA10Q9UK55 444 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 CCPG1Q9ULG6 757 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 C1orf167Q5SNV9 1468 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 HOXA13P31271 388 aaPredicted RBP15.84■□□□□ 0.13
SCARB2-216ENST00000639300 PRCPP42785 496 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 CNKSR1Q969H4 720 aa15.84■□□□□ 0.13
SCARB2-216ENST00000639300 OSBPL5Q9H0X9 879 aaPredicted RBP15.84■□□□□ 0.13
SCARB2-216ENST00000639300 RAD17O75943 681 aa15.83■□□□□ 0.13
SCARB2-216ENST00000639300 KCTD16Q68DU8 428 aa15.83■□□□□ 0.13
SCARB2-216ENST00000639300 RETREG2Q8NC44 543 aa15.83■□□□□ 0.13
SCARB2-216ENST00000639300 PANX2Q96RD6 677 aa15.83■□□□□ 0.13
SCARB2-216ENST00000639300 KCNF1Q9H3M0 494 aa15.83■□□□□ 0.13
SCARB2-216ENST00000639300 EMILIN3Q9NT22 766 aa15.83■□□□□ 0.13
SCARB2-216ENST00000639300 SWAP70Q9UH65 585 aa15.83■□□□□ 0.13
SCARB2-216ENST00000639300 CTNNA1P35221 906 aaKnown RBP15.83■□□□□ 0.12
SCARB2-216ENST00000639300 ARMCX5Q6P1M9 558 aa15.83■□□□□ 0.12
SCARB2-216ENST00000639300 METTL16Q86W50 562 aaKnown RBP15.83■□□□□ 0.12
SCARB2-216ENST00000639300 MSANTD4Q8NCY6 345 aa15.83■□□□□ 0.12
SCARB2-216ENST00000639300 CABS1Q96KC9 395 aa15.83■□□□□ 0.12
SCARB2-216ENST00000639300 EPC1Q9H2F5 836 aa15.83■□□□□ 0.12
SCARB2-216ENST00000639300 COL15A1P39059 1388 aa15.83■□□□□ 0.12
SCARB2-216ENST00000639300 KRT19P08727 400 aa15.83■□□□□ 0.12
SCARB2-216ENST00000639300 BMP3P12645 472 aa15.83■□□□□ 0.12
SCARB2-216ENST00000639300 NHEJ1Q9H9Q4 299 aaPredicted RBP15.83■□□□□ 0.12
SCARB2-216ENST00000639300 CSF1RP07333 972 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 B4GALNT4Q76KP1 1039 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 STAG2Q8N3U4 1231 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 ARHGEF1Q92888 912 aaKnown RBP15.82■□□□□ 0.12
SCARB2-216ENST00000639300 GLG1Q92896 1179 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 CEP95Q96GE4 821 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 KRT12Q99456 494 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 RIC8AQ9NPQ8 531 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 TRPC5Q9UL62 973 aaPredicted RBP15.82■□□□□ 0.12
SCARB2-216ENST00000639300 LRRN2O75325 713 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 FTCDO95954 541 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 GCFC2P16383 781 aaKnown RBP15.82■□□□□ 0.12
SCARB2-216ENST00000639300 INPP5BP32019 993 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 CCDC6Q16204 474 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 ARHGEF16Q5VV41 709 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 FAM133AQ8N9E0 248 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 TTC16Q8NEE8 873 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 TEKT3Q9BXF9 490 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 ADAMTS1Q9UHI8 967 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 PLA2G4BP0C869 781 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 MXRA7P84157 204 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 CC2D2BQ6DHV5 1058 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 MCTP2Q6DN12 878 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 MB21D1Q8N884 522 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 ZNF408Q9H9D4 720 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L15C9J2P7 530 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L13C9JLJ4 530 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L11C9JVI0 530 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L18D6R9N7 530 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L22D6RA61 530 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L17D6RBQ6 530 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L19D6RCP7 530 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L20D6RJB6 530 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 MOCS3O95396 460 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 IFNB1P01574 187 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 GNGT1P63211 74 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L24Q0WX57 530 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 TTC19Q6DKK2 380 aaPredicted RBP15.82■□□□□ 0.12
SCARB2-216ENST00000639300 USP17L6PQ6QN14 398 aa15.82■□□□□ 0.12
SCARB2-216ENST00000639300 CCDC151A5D8V7 595 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 MYL1P05976 194 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 TXNRD1Q16881 649 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 MAK16Q9BXY0 300 aaKnown RBP15.81■□□□□ 0.12
SCARB2-216ENST00000639300 PI4KBQ9UBF8 816 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 BCS1LQ9Y276 419 aa15.81■□□□□ 0.12
SCARB2-216ENST00000639300 SFI1A8K8P3 1242 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms