RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 V9GYY5 206 aaPredicted RBP24.09■■□□□ 1.45
CLN6-224ENST00000638076 ATRNL1Q5VV63 1379 aa24.09■■□□□ 1.45
CLN6-224ENST00000638076 CNNM4Q6P4Q7 775 aa24.09■■□□□ 1.45
CLN6-224ENST00000638076 CSGALNACT2Q8N6G5 542 aa24.09■■□□□ 1.45
CLN6-224ENST00000638076 GJA10Q969M2 543 aa24.09■■□□□ 1.45
CLN6-224ENST00000638076 NUP88Q99567 741 aaPredicted RBP24.09■■□□□ 1.45
CLN6-224ENST00000638076 GTPBP4Q9BZE4 634 aaKnown RBP24.09■■□□□ 1.45
CLN6-224ENST00000638076 MAGEC2Q9UBF1 373 aaPredicted RBP24.09■■□□□ 1.45
CLN6-224ENST00000638076 BICDL2A1A5D9 508 aa24.08■■□□□ 1.45
CLN6-224ENST00000638076 MYMKA6NI61 221 aa24.08■■□□□ 1.45
CLN6-224ENST00000638076 MARCH6O60337 910 aa24.08■■□□□ 1.45
CLN6-224ENST00000638076 CCDC175P0C221 793 aa24.08■■□□□ 1.45
CLN6-224ENST00000638076 GCFC2P16383 781 aaKnown RBP24.08■■□□□ 1.45
CLN6-224ENST00000638076 TRIM14Q14142 442 aa24.08■■□□□ 1.45
CLN6-224ENST00000638076 NOC3LQ8WTT2 800 aaKnown RBP24.08■■□□□ 1.45
CLN6-224ENST00000638076 HPS3Q969F9 1004 aa24.08■■□□□ 1.45
CLN6-224ENST00000638076 ANKRD40Q6AI12 368 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 KIAA0895Q8NCT3 520 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 RAD54LQ92698 747 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 CAMKK2Q96RR4 588 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 CSRNP1Q96S65 589 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 RNF225M0QZC1 329 aaPredicted RBP24.07■■□□□ 1.44
CLN6-224ENST00000638076 PES1O00541 588 aaKnown RBP24.07■■□□□ 1.44
CLN6-224ENST00000638076 GH2P01242 217 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 PPP1R2P41236 205 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 JAG1P78504 1218 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 GMCL1P1Q8NEA9 526 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 SLC39A2Q9NP94 309 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 ABHD10Q9NUJ1 306 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 MYH7BA7E2Y1 1941 aa24.07■■□□□ 1.44
CLN6-224ENST00000638076 LGALS16A8MUM7 142 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 GNG11P61952 73 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 RBM26Q5T8P6 1007 aaKnown RBP24.06■■□□□ 1.44
CLN6-224ENST00000638076 DYMQ7RTS9 669 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 MB21D1Q8N884 522 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 EEF2KMTQ96G04 330 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 MRPL44Q9H9J2 332 aaKnown RBP24.06■■□□□ 1.44
CLN6-224ENST00000638076 ADGRG1Q9Y653 693 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 NDUFB10O96000 172 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 FECHP22830 423 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 SNAP25P60880 206 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 TMEM119Q4V9L6 283 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 KCNK18Q7Z418 384 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 ANO3Q9BYT9 981 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 PCDHA12Q9UN75 941 aa24.06■■□□□ 1.44
CLN6-224ENST00000638076 RRP1BQ14684 758 aaKnown RBP24.05■■□□□ 1.44
CLN6-224ENST00000638076 COBLL1Q53SF7 1204 aa24.05■■□□□ 1.44
CLN6-224ENST00000638076 UNC13DQ70J99 1090 aa24.05■■□□□ 1.44
CLN6-224ENST00000638076 ZNF507Q8TCN5 953 aa24.05■■□□□ 1.44
CLN6-224ENST00000638076 GMCL1Q96IK5 515 aa24.05■■□□□ 1.44
CLN6-224ENST00000638076 NAP1L4Q99733 375 aaKnown RBP24.05■■□□□ 1.44
CLN6-224ENST00000638076 PVALEFA0A1B0GWK0 134 aa24.05■■□□□ 1.44
CLN6-224ENST00000638076 IKQ13123 557 aaPredicted RBP24.05■■□□□ 1.44
CLN6-224ENST00000638076 ECM1Q16610 540 aa24.05■■□□□ 1.44
CLN6-224ENST00000638076 WDR24Q96S15 920 aa24.05■■□□□ 1.44
CLN6-224ENST00000638076 MEIS2O14770 477 aa24.04■■□□□ 1.44
CLN6-224ENST00000638076 URI1O94763 535 aaPredicted RBP24.04■■□□□ 1.44
CLN6-224ENST00000638076 TUBGCP2Q9BSJ2 902 aa24.04■■□□□ 1.44
CLN6-224ENST00000638076 AMNQ9BXJ7 453 aa24.04■■□□□ 1.44
CLN6-224ENST00000638076 TCP10L2B9ZVM9 353 aa24.04■■□□□ 1.44
CLN6-224ENST00000638076 LRRN4CLQ8ND94 238 aa24.04■■□□□ 1.44
CLN6-224ENST00000638076 UIMC1Q96RL1 719 aa24.04■■□□□ 1.44
CLN6-224ENST00000638076 PDGFDQ9GZP0 370 aaPredicted RBP24.04■■□□□ 1.44
CLN6-224ENST00000638076 A0A1W2PQC6 194 aa24.03■■□□□ 1.44
CLN6-224ENST00000638076 KRT9P35527 623 aa24.03■■□□□ 1.44
CLN6-224ENST00000638076 USP11P51784 963 aa24.03■■□□□ 1.44
CLN6-224ENST00000638076 ERVK-24P63145 666 aa24.03■■□□□ 1.44
CLN6-224ENST00000638076 TMTC1Q8IUR5 882 aa24.03■■□□□ 1.44
CLN6-224ENST00000638076 DDX12PQ92771 950 aa24.03■■□□□ 1.44
CLN6-224ENST00000638076 B4DLN1 442 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 CASQ1P31415 396 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 ELF2Q15723 593 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 USH1GQ495M9 461 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 SYDE2Q5VT97 1194 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 CNOT6LQ96LI5 555 aaKnown RBP24.02■■□□□ 1.44
CLN6-224ENST00000638076 CCDC94Q9BW85 323 aaPredicted RBP24.02■■□□□ 1.44
CLN6-224ENST00000638076 SEMA6BQ9H3T3 888 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.02■■□□□ 1.44
CLN6-224ENST00000638076 TMOD2Q9NZR1 351 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 A0A1W2PRG0 241 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 RAD17O75943 681 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 BMP3P12645 472 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 IDEP14735 1019 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 RSBN1LQ6PCB5 846 aaPredicted RBP24.02■■□□□ 1.44
CLN6-224ENST00000638076 FBXO11Q86XK2 927 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 FAM114A1Q8IWE2 563 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 LRRC27Q9C0I9 530 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 LZTFL1Q9NQ48 299 aa24.02■■□□□ 1.44
CLN6-224ENST00000638076 CGNQ9P2M7 1197 aaKnown RBP24.02■■□□□ 1.44
CLN6-224ENST00000638076 COL2A1P02458 1487 aaPredicted RBP24.02■■□□□ 1.44
CLN6-224ENST00000638076 CLRN2A0PK11 232 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 SPDYE2BA6NHP3 402 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 SPDYE6P0CI01 402 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 DNM2P50570 870 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 AP3B2Q13367 1082 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 CYP26C1Q6V0L0 522 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 TTLL6Q8N841 843 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 A0A0U1RQJ8 604 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 TTC26A0AVF1 554 aa24.01■■□□□ 1.43
CLN6-224ENST00000638076 CENPPQ6IPU0 288 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms