RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 CPVLQ9H3G5 476 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 HIPK3Q9H422 1215 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 IL23AQ9NPF7 189 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 GRIN2DO15399 1336 aa15.31■□□□□ 0.04
SYNGAP1-224ENST00000637721 PRUNE2Q8WUY3 3088 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 CYP21A2P08686 494 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 VCANP13611 3396 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 CSF2RAP15509 400 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 GHRHRQ02643 423 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 STXBP2Q15833 593 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 TMEM63BQ5T3F8 832 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 KIAA1217Q5T5P2 1943 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 RASIP1Q5U651 963 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 NFRKBQ6P4R8 1299 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 RALYLQ86SE5 291 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 RPUSD2Q8IZ73 545 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 NCOA7Q8NI08 942 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 RMDN3Q96TC7 470 aa15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 ALDH8A1Q9H2A2 487 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-224ENST00000637721 PALM3A6NDB9 673 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 KLRF2D3W0D1 207 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 ZBTB5O15062 677 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 SGSM2O43147 1006 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 B4GALT4O60513 344 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 PFKMP08237 780 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 MYL3P08590 195 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 TXNP10599 105 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 C16orf59Q7L2K0 433 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 HERVK_113Q902F9 699 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 MTMR8Q96EF0 704 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 FAM161BQ96MY7 647 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 CDX2Q99626 313 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 NOC4LQ9BVI4 516 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 VAT1LQ9HCJ6 419 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 MAD2L2Q9UI95 211 aa15.29■□□□□ 0.04
SYNGAP1-224ENST00000637721 IFIT3O14879 490 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 EIF3JO75822 258 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 DNAJB2P25686 324 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 CYP2C18P33260 490 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 PSMC6P62333 389 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 ARHGEF16Q5VV41 709 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 CCDC62Q6P9F0 684 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 ZNF365Q70YC5 407 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 CYB5R4Q7L1T6 521 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 STAG2Q8N3U4 1231 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 TAAR1Q96RJ0 339 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 MTA3Q9BTC8 594 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 TTYH1Q9H313 450 aaPredicted RBP15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 PPP4R2Q9NY27 417 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 CHD9Q3L8U1 2897 aa15.28■□□□□ 0.04
SYNGAP1-224ENST00000637721 SPTBN5Q9NRC6 3674 aaKnown RBP15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 E7EWF7 191 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 GH1P01241 217 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 FGBP02675 491 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 PTGS1P23219 599 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 HSD17B4P51659 736 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 PTH1RQ03431 593 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 GRM4Q14833 912 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 WTAPQ15007 396 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 KCNV1Q6PIU1 500 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 MAP4K1Q92918 833 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 EMID1Q96A84 441 aaPredicted RBP15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 TIFAQ96CG3 184 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 TRPV6Q9H1D0 765 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 RIOX1Q9H6W3 641 aa15.27■□□□□ 0.04
SYNGAP1-224ENST00000637721 PITPNM1O00562 1244 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 ARIH2O95376 493 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 CFBP00751 764 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 ACRP10323 421 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 RFC2P35250 354 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 RAB30Q15771 203 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 CATIPQ7Z7H3 387 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 TBC1D5Q92609 795 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 MAP3K14Q99558 947 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 PXMP2Q9NR77 195 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 COL20A1Q9P218 1284 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 PCDHA1Q9Y5I3 950 aa15.26■□□□□ 0.03
SYNGAP1-224ENST00000637721 DLL1O00548 723 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 NR3C2P08235 984 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 FOSL2P15408 326 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 CASTP20810 708 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 CCL23P55773 120 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 TROAPQ12815 778 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 NBPF20Q3BBV1 942 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 SEPT14Q6ZU15 432 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 STOX1Q6ZVD7 989 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 SESTD1Q86VW0 696 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 COPS5Q92905 334 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 KATNAL1Q9BW62 490 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 WNT8AQ9H1J5 351 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 TRMT13Q9NUP7 481 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 DDX41Q9UJV9 622 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 MYO9BQ13459 2157 aa15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 BAZ2BQ9UIF8 2168 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-224ENST00000637721 UMODL1Q5DID0 1318 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 PNMA6FA0A0J9YX94 578 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 MMP3P08254 477 aa15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 EIF2AK2P19525 551 aaKnown RBP15.24■□□□□ 0.03
SYNGAP1-224ENST00000637721 ARHGAP1Q07960 439 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms