RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
CLN6-216ENST00000636876 KRT40Q6A162 431 aa18.34■□□□□ 0.53
CLN6-216ENST00000636876 FBXO46Q6PJ61 603 aaPredicted RBP18.34■□□□□ 0.53
CLN6-216ENST00000636876 BLIDQ8IZY5 108 aa18.34■□□□□ 0.53
CLN6-216ENST00000636876 REXO1Q8N1G1 1221 aaKnown RBP18.34■□□□□ 0.53
CLN6-216ENST00000636876 PXYLP1Q8TE99 480 aa18.34■□□□□ 0.53
CLN6-216ENST00000636876 RMDN3Q96TC7 470 aa18.34■□□□□ 0.53
CLN6-216ENST00000636876 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
CLN6-216ENST00000636876 FLRT1Q9NZU1 646 aa18.34■□□□□ 0.53
CLN6-216ENST00000636876 LOC102724159A0A0B4J2E5 919 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 FOSP01100 380 aaPredicted RBP18.33■□□□□ 0.52
CLN6-216ENST00000636876 IGHA2P01877 340 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 HSP90AA1P07900 732 aaKnown RBP18.33■□□□□ 0.52
CLN6-216ENST00000636876 ELNP15502 786 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 AP3B2Q13367 1082 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 PWP2Q15269 919 aaKnown RBP18.33■□□□□ 0.52
CLN6-216ENST00000636876 MCTP2Q6DN12 878 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 MSL3Q8N5Y2 521 aaKnown RBP18.33■□□□□ 0.52
CLN6-216ENST00000636876 SLAIN1Q8ND83 568 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 NSUN6Q8TEA1 469 aaKnown RBP18.33■□□□□ 0.52
CLN6-216ENST00000636876 TRIB2Q92519 343 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 PXMP2Q9NR77 195 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 TSHZ2Q9NRE2 1034 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 TMEM260Q9NX78 707 aa18.33■□□□□ 0.52
CLN6-216ENST00000636876 BIN2Q9UBW5 565 aaPredicted RBP18.33■□□□□ 0.52
CLN6-216ENST00000636876 FRMPD4Q14CM0 1322 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 ASB14A6NK59 587 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 SPDYE3A6NKU9 549 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 MMP1P03956 469 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 EIF2AK2P19525 551 aaKnown RBP18.32■□□□□ 0.52
CLN6-216ENST00000636876 GRK4P32298 578 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 GUCY1B3Q02153 619 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 JAKMIP3Q5VZ66 844 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 MAMDC4Q6UXC1 1216 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 FBXO18Q8NFZ0 1043 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 RASGRP4Q8TDF6 673 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 TINF2Q9BSI4 451 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 PCDHA6Q9UN73 950 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 PCDHA8Q9Y5H6 950 aa18.32■□□□□ 0.52
CLN6-216ENST00000636876 MCM3APO60318 1980 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 RPTORQ8N122 1335 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 SYNGAP1Q96PV0 1343 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 B4DLN1 442 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 M0R2N6 131 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 HMGCRP04035 888 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 EDNRBP24530 442 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 SOX10P56693 466 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 ARMCX2Q7L311 632 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 MORC4Q8TE76 937 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 IWS1Q96ST2 819 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 PDCD2LQ9BRP1 358 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 ANO3Q9BYT9 981 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 EHMT1Q9H9B1 1298 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 BRMS1Q9HCU9 246 aa18.31■□□□□ 0.52
CLN6-216ENST00000636876 SLC34A2O95436 690 aa18.3■□□□□ 0.52
CLN6-216ENST00000636876 CYP2C19P33261 490 aa18.3■□□□□ 0.52
CLN6-216ENST00000636876 KRT2P35908 639 aa18.3■□□□□ 0.52
CLN6-216ENST00000636876 ANP32AP39687 249 aaKnown RBP18.3■□□□□ 0.52
CLN6-216ENST00000636876 SAFBQ15424 915 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLN6-216ENST00000636876 DIS3L2Q8IYB7 885 aaKnown RBP18.3■□□□□ 0.52
CLN6-216ENST00000636876 IL31RAQ8NI17 732 aa18.3■□□□□ 0.52
CLN6-216ENST00000636876 OXER1Q8TDS5 423 aa18.3■□□□□ 0.52
CLN6-216ENST00000636876 PGBD1Q96JS3 809 aa18.3■□□□□ 0.52
CLN6-216ENST00000636876 MPHOSPH6Q99547 160 aaKnown RBP18.3■□□□□ 0.52
CLN6-216ENST00000636876 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.3■□□□□ 0.52
CLN6-216ENST00000636876 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
CLN6-216ENST00000636876 NR3C2P08235 984 aa18.29■□□□□ 0.52
CLN6-216ENST00000636876 PDCP20941 246 aa18.29■□□□□ 0.52
CLN6-216ENST00000636876 UBXN2AP68543 259 aa18.29■□□□□ 0.52
CLN6-216ENST00000636876 PDE4DQ08499 809 aa18.29■□□□□ 0.52
CLN6-216ENST00000636876 PGM5Q15124 567 aa18.29■□□□□ 0.52
CLN6-216ENST00000636876 SLC9C1Q4G0N8 1177 aa18.29■□□□□ 0.52
CLN6-216ENST00000636876 LARP1BQ659C4 914 aaKnown RBP18.29■□□□□ 0.52
CLN6-216ENST00000636876 SPRYD3Q8NCJ5 442 aa18.29■□□□□ 0.52
CLN6-216ENST00000636876 H3BQV1 296 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 SNAI1O95863 264 aaPredicted RBP18.28■□□□□ 0.52
CLN6-216ENST00000636876 INHAP05111 366 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 CCND2P30279 289 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 SREBF1P36956 1147 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 TRIM32Q13049 653 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 NR5A1Q13285 461 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 KRT25Q7Z3Z0 450 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 VSIG10LQ86VR7 867 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 SH3TC2Q8TF17 1288 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 TNFRSF25Q93038 417 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 CENPFP49454 3210 aa18.28■□□□□ 0.52
CLN6-216ENST00000636876 LRRC37A2A6NM11 1700 aa18.27■□□□□ 0.52
CLN6-216ENST00000636876 BTBD18B2RXH4 712 aa18.27■□□□□ 0.52
CLN6-216ENST00000636876 MYCLP12524 364 aaPredicted RBP18.27■□□□□ 0.52
CLN6-216ENST00000636876 CACNB2Q08289 660 aaPredicted RBP18.27■□□□□ 0.52
CLN6-216ENST00000636876 STXBP2Q15833 593 aa18.27■□□□□ 0.52
CLN6-216ENST00000636876 MAP3K21Q5TCX8 1036 aa18.27■□□□□ 0.52
CLN6-216ENST00000636876 PCNX4Q63HM2 1172 aa18.27■□□□□ 0.52
CLN6-216ENST00000636876 XRRA1Q6P2D8 792 aa18.27■□□□□ 0.52
CLN6-216ENST00000636876 KATNBL1Q9H079 304 aa18.27■□□□□ 0.52
CLN6-216ENST00000636876 NRBP1Q9UHY1 535 aa18.27■□□□□ 0.52
CLN6-216ENST00000636876 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.52
CLN6-216ENST00000636876 RBM19Q9Y4C8 960 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms