RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 TSPY3P0CV98 308 aa23.95■■□□□ 1.43
CLN5-215ENST00000636767 TSPY8P0CW00 308 aa23.95■■□□□ 1.43
CLN5-215ENST00000636767 MRPS25P82663 173 aaKnown RBP23.95■■□□□ 1.43
CLN5-215ENST00000636767 AMPD3Q01432 767 aa23.95■■□□□ 1.43
CLN5-215ENST00000636767 PACS2Q86VP3 889 aa23.95■■□□□ 1.43
CLN5-215ENST00000636767 DZIP1Q86YF9 867 aaKnown RBP23.95■■□□□ 1.43
CLN5-215ENST00000636767 CPVLQ9H3G5 476 aa23.95■■□□□ 1.43
CLN5-215ENST00000636767 MKNK2Q9HBH9 465 aa23.95■■□□□ 1.43
CLN5-215ENST00000636767 NT5C2P49902 561 aa23.95■■□□□ 1.42
CLN5-215ENST00000636767 NAPAP54920 295 aa23.95■■□□□ 1.42
CLN5-215ENST00000636767 SH3GL2Q99962 352 aa23.95■■□□□ 1.42
CLN5-215ENST00000636767 TMEM47Q9BQJ4 181 aa23.95■■□□□ 1.42
CLN5-215ENST00000636767 DEF6Q9H4E7 631 aa23.95■■□□□ 1.42
CLN5-215ENST00000636767 TCP1P17987 556 aaKnown RBP23.94■■□□□ 1.42
CLN5-215ENST00000636767 SLC7A5Q01650 507 aa23.94■■□□□ 1.42
CLN5-215ENST00000636767 SLC44A5Q8NCS7 719 aa23.94■■□□□ 1.42
CLN5-215ENST00000636767 ALS2CR12Q96Q35 445 aa23.94■■□□□ 1.42
CLN5-215ENST00000636767 PSMB7Q99436 277 aa23.94■■□□□ 1.42
CLN5-215ENST00000636767 EHD2Q9NZN4 543 aa23.94■■□□□ 1.42
CLN5-215ENST00000636767 CXCR5P32302 372 aa23.94■■□□□ 1.42
CLN5-215ENST00000636767 MATR3P43243 847 aaKnown RBP eCLIP23.94■■□□□ 1.42
CLN5-215ENST00000636767 IRAK1P51617 712 aa23.94■■□□□ 1.42
CLN5-215ENST00000636767 TTC31Q49AM3 519 aaPredicted RBP23.94■■□□□ 1.42
CLN5-215ENST00000636767 HAUS3Q68CZ6 603 aa23.94■■□□□ 1.42
CLN5-215ENST00000636767 GPIHBP1Q8IV16 184 aa23.94■■□□□ 1.42
CLN5-215ENST00000636767 LRRC53A6NM62 1247 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 AKR1B10O60218 316 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 RPS8P62241 208 aaKnown RBP23.93■■□□□ 1.42
CLN5-215ENST00000636767 PPFIA1Q13136 1202 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 MAN2A1Q16706 1144 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 NEK8Q86SG6 692 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 TXNRD3Q86VQ6 643 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 SH3RF3Q8TEJ3 882 aaPredicted RBP23.93■■□□□ 1.42
CLN5-215ENST00000636767 PPM1EQ8WY54 764 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 MMRN2Q9H8L6 949 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 SALL4Q9UJQ4 1053 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 STX8Q9UNK0 236 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 KLRF2D3W0D1 207 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 SKIDA1Q1XH10 827 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 BICDL1Q6ZP65 573 aa23.93■■□□□ 1.42
CLN5-215ENST00000636767 NCK2O43639 380 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 EPHB4P54760 987 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 RRAGAQ7L523 313 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 TSEN2Q8NCE0 465 aaKnown RBP23.92■■□□□ 1.42
CLN5-215ENST00000636767 BAP1Q92560 729 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 CALML4Q96GE6 196 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 LZTS2Q9BRK4 669 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 SPZ1Q9BXG8 430 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 BLOC1S4Q9NUP1 217 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 STIM2Q9P246 746 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
CLN5-215ENST00000636767 COL5A3P25940 1745 aaPredicted RBP23.92■■□□□ 1.42
CLN5-215ENST00000636767 SMCO2A6NFE2 343 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 MYMKA6NI61 221 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 GOLGA8KD6RF30 607 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 GRB10Q13322 594 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 POTEDQ86YR6 584 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 EFCAB13Q8IY85 973 aa23.92■■□□□ 1.42
CLN5-215ENST00000636767 GRIN2DO15399 1336 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 ABCB11O95342 1321 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 PJA2O43164 708 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 CCDC181Q5TID7 509 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 SV2BQ7L1I2 683 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 NAV1Q8NEY1 1877 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 CAPS2Q9BXY5 557 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 EHD4Q9H223 541 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 MAGEA1P43355 309 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 SLC10A5Q5PT55 438 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 EMBQ6PCB8 327 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 UNC13DQ70J99 1090 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 CCDC84Q86UT8 332 aaPredicted RBP23.91■■□□□ 1.42
CLN5-215ENST00000636767 ZNF444Q8N0Y2 327 aaPredicted RBP23.91■■□□□ 1.42
CLN5-215ENST00000636767 TBCKQ8TEA7 893 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 C6orf50Q9HD87 102 aa23.91■■□□□ 1.42
CLN5-215ENST00000636767 TNFRSF8P28908 595 aa23.9■■□□□ 1.42
CLN5-215ENST00000636767 CCT5P48643 541 aa23.9■■□□□ 1.42
CLN5-215ENST00000636767 ASTE1Q2TB18 679 aaPredicted RBP23.9■■□□□ 1.42
CLN5-215ENST00000636767 ANKRD13CQ8N6S4 541 aa23.9■■□□□ 1.42
CLN5-215ENST00000636767 MTMR8Q96EF0 704 aa23.9■■□□□ 1.42
CLN5-215ENST00000636767 TLR10Q9BXR5 811 aa23.9■■□□□ 1.42
CLN5-215ENST00000636767 ANKRD2Q9GZV1 360 aa23.9■■□□□ 1.42
CLN5-215ENST00000636767 RASA1P20936 1047 aa23.89■■□□□ 1.42
CLN5-215ENST00000636767 ATP2B2Q01814 1243 aa23.89■■□□□ 1.42
CLN5-215ENST00000636767 DDB1Q16531 1140 aa23.89■■□□□ 1.42
CLN5-215ENST00000636767 SPTY2D1Q68D10 685 aaPredicted RBP23.89■■□□□ 1.42
CLN5-215ENST00000636767 GBP6Q6ZN66 633 aa23.89■■□□□ 1.42
CLN5-215ENST00000636767 GNA11P29992 359 aa23.89■■□□□ 1.41
CLN5-215ENST00000636767 GFPT1Q06210 699 aaPredicted RBP23.89■■□□□ 1.41
CLN5-215ENST00000636767 PDXDC1Q6P996 788 aa23.89■■□□□ 1.41
CLN5-215ENST00000636767 LRRC55Q6ZSA7 311 aa23.89■■□□□ 1.41
CLN5-215ENST00000636767 GUF1Q8N442 669 aaKnown RBP23.89■■□□□ 1.41
CLN5-215ENST00000636767 CAVIN3Q969G5 261 aa23.89■■□□□ 1.41
CLN5-215ENST00000636767 PNMA5Q96PV4 448 aa23.89■■□□□ 1.41
CLN5-215ENST00000636767 RBM12Q9NTZ6 932 aaKnown RBP23.89■■□□□ 1.41
CLN5-215ENST00000636767 IRS2Q9Y4H2 1338 aa23.89■■□□□ 1.41
CLN5-215ENST00000636767 PVALEFA0A1B0GWK0 134 aa23.88■■□□□ 1.41
CLN5-215ENST00000636767 EIF3HO15372 352 aaKnown RBP eCLIP23.88■■□□□ 1.41
CLN5-215ENST00000636767 OPA1O60313 960 aa23.88■■□□□ 1.41
CLN5-215ENST00000636767 CPP00450 1065 aa23.88■■□□□ 1.41
CLN5-215ENST00000636767 EPB41P11171 864 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms