RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	SHCBP1	Q8NEM2	672 aa		10.91	□□□□□ -0.66
CACNA1A-223	ENST00000636058	GPRC5A	Q8NFJ5	357 aa		10.91	□□□□□ -0.66
CACNA1A-223	ENST00000636058	NAP1L4	Q99733	375 aa	Known RBP	10.91	□□□□□ -0.66
CACNA1A-223	ENST00000636058	EHMT1	Q9H9B1	1298 aa		10.91	□□□□□ -0.66
CACNA1A-223	ENST00000636058	A1CF	Q9NQ94	594 aa	Known RBP	10.91	□□□□□ -0.66
CACNA1A-223	ENST00000636058	CYP39A1	Q9NYL5	469 aa		10.91	□□□□□ -0.66
CACNA1A-223	ENST00000636058	LCT	P09848	1927 aa		10.91	□□□□□ -0.66
CACNA1A-223	ENST00000636058	PFAS	O15067	1338 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	LAD1	O00515	517 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	CCNT1	O60563	726 aa	Known RBP	10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	GADD45B	O75293	160 aa	Predicted RBP	10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	TDP2	O95551	362 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	GCFC2	P16383	781 aa	Known RBP	10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	CYP3A7	P24462	503 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	CIITA	P33076	1130 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	UBE2H	P62256	183 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	PTGDR	Q13258	359 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	FAM110C	Q1W6H9	321 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	NCAPG2	Q86XI2	1143 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	JMY	Q8N9B5	988 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	CAPNS2	Q96L46	248 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	MBOAT7	Q96N66	472 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	ZIC5	Q96T25	663 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	MROH8	Q9H579	483 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	FBXO2	Q9UK22	296 aa	Predicted RBP	10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	PCDHA7	Q9UN72	937 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	MRVI1	Q9Y6F6	885 aa		10.9	□□□□□ -0.66
CACNA1A-223	ENST00000636058	SLC37A4	O43826	429 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	NEMF	O60524	1076 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PTPRE	P23469	700 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MARCKS	P29966	332 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ME1	P48163	572 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CCNA1	P78396	465 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	GRM1	Q13255	1194 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	TAF1C	Q15572	869 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ARL6IP4	Q66PJ3	421 aa	Known RBP	10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ADAL	Q6DHV7	355 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	REM2	Q8IYK8	340 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ANKRD35	Q8N283	1001 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	TAAR1	Q96RJ0	339 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PORCN	Q9H237	461 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	R3HDML	Q9H3Y0	253 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PXMP2	Q9NR77	195 aa		10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	SRPRB	Q9Y5M8	271 aa	Known RBP	10.89	□□□□□ -0.67
CACNA1A-223	ENST00000636058	THSD7B	Q9C0I4	1608 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058		A0A1W2PQ27	194 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058		A0A1W2PQ64	194 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058		A0A1W2PQD8	194 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FAM86B1	E9PN63	330 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	TLR2	O60603	784 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CUTA	O60888	179 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FAM86B2	P0C5J1	330 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	BCR	P11274	1271 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PRPH	P41219	470 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PGM5	Q15124	567 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058		Q4G0T1	1027 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PCNX4	Q63HM2	1172 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	POTED	Q86YR6	584 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	KRI1	Q8N9T8	703 aa	Known RBP	10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	GPT2	Q8TD30	523 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FERMT2	Q96AC1	680 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	LENG9	Q96B70	501 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MTMR9	Q96QG7	549 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PURB	Q96QR8	312 aa	Known RBP	10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	RMDN3	Q96TC7	470 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PDCD2L	Q9BRP1	358 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	TMEM60	Q9H2L4	133 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	EFCC1	Q9HA90	598 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	DDX25	Q9UHL0	483 aa	Known RBP	10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	PLXNB2	O15031	1838 aa		10.88	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ZNF236	Q9UL36	1845 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	DNAJC25-GNG10	A0A024R161	153 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	IGLV3-22	A0A075B6J6	115 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	GOLGA6L4	A6NEF3	574 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	AOC2	O75106	756 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	MBD3	O95983	291 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ALDH1A1	P00352	501 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	OR52Z1	P0C646	297 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FCER1A	P12319	257 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	EIF2AK2	P19525	551 aa	Known RBP	10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	UBXN2A	P68543	259 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	GRIN1	Q05586	938 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CRHR2	Q13324	411 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	KCTD2	Q14681	263 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	IL17A	Q16552	155 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CALCRL	Q16602	461 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ARHGEF16	Q5VV41	709 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	XRRA1	Q6P2D8	792 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	C17orf99	Q6UX52	265 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ABRA	Q8N0Z2	381 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	FAM133A	Q8N9E0	248 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	ZNF579	Q8NAF0	562 aa	Known RBP	10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	DNER	Q8NFT8	737 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	IL31RA	Q8NI17	732 aa		10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	NSUN6	Q8TEA1	469 aa	Known RBP	10.87	□□□□□ -0.67
CACNA1A-223	ENST00000636058	CLIC6	Q96NY7	704 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms