RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TMEM60Q9H2L4 133 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 NDST4Q9H3R1 872 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 ZBTB1Q9Y2K1 713 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 NUP98P52948 1817 aa16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 GRID2IPA4D2P6 1211 aa16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 CHRNDQ07001 517 aa16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 STK4Q13043 487 aa16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 MAN2A1Q16706 1144 aa16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 CCDC43Q96MW1 224 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 RBM12Q9NTZ6 932 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 HMGB1P1B2RPK0 211 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 ADAMTS3O15072 1205 aa16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 VEGFAP15692 232 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 PLCG1P19174 1290 aa16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 CXCR5P32302 372 aa16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 NAP1L1P55209 391 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 DYNLL1P63167 89 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 CENPPQ6IPU0 288 aa16.4■□□□□ 0.22
CACNA1A-220ENST00000635988 PPP1R37O75864 691 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 NR1D1P20393 614 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 MAP2K2P36507 400 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 PLCB4Q15147 1175 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 PLIN2Q99541 437 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 MMRN2Q9H8L6 949 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 KRT14P02533 472 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 ATP1A2P50993 1020 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 DRP2Q13474 957 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 NAA35Q5VZE5 725 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 ARFGAP2Q8N6H7 521 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 EEF2KMTQ96G04 330 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 RNPC3Q96LT9 517 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 PSMB7Q99436 277 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 FAM207AQ9NSI2 230 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 PCDHA6Q9UN73 950 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 PCDHA8Q9Y5H6 950 aa16.39■□□□□ 0.21
CACNA1A-220ENST00000635988 FLT1P17948 1338 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 SUSD4Q5VX71 490 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 RRAGAQ7L523 313 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 SH2D3CQ8N5H7 860 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 EIF1ADQ8N9N8 165 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 NFU1Q9UMS0 254 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 LOC102724159A0A0B4J2E5 919 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 ZNF233A6NK53 670 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 TSPY2A6NKD2 308 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 LRRC53A6NM62 1247 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 RBAK-RBAKDNI3L0D1 243 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 HEXIM1O94992 359 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 PWP2Q15269 919 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 PTGISQ16647 500 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 INF2Q27J81 1249 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 ASTE1Q2TB18 679 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 RASGRP4Q8TDF6 673 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 ATP6V1G3Q96LB4 118 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 EPB41L5Q9HCM4 733 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
CACNA1A-220ENST00000635988 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 NMT2O60551 498 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 GLI1P08151 1106 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 OR52Z1P0C646 297 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 MDH1P40925 334 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 CARSP49589 748 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 MRPS25P82663 173 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 PARP10Q53GL7 1025 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 GPATCH11Q8N954 259 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 C3orf20Q8ND61 904 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 ZNF473Q8WTR7 871 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 GPKOWQ92917 476 aaPredicted RBP eCLIP16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 SEMA6BQ9H3T3 888 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 ARPP21Q9UBL0 812 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 GOLGA6L10A6NI86 522 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 NCK2O43639 380 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 FCER1AP12319 257 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 GUCY2DQ02846 1103 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 LRRC63Q05C16 580 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 SBK1Q52WX2 424 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 PDXDC1Q6P996 788 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 CACNA2D4Q7Z3S7 1137 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 DGKHQ86XP1 1220 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 SMARCAL1Q9NZC9 954 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 EHD2Q9NZN4 543 aa16.37■□□□□ 0.21
CACNA1A-220ENST00000635988 CACNA1SQ13698 1873 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 FAM107AO95990 144 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 RASSF7Q02833 373 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 TXNRD1Q16881 649 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 CAVIN4Q5BKX8 364 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 RCSD1Q6JBY9 416 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 FOXR2Q6PJQ5 311 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 LRRC15Q8TF66 581 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 IFT81Q8WYA0 676 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 BAP1Q92560 729 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 SYN2Q92777 582 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 MTMR8Q96EF0 704 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms