RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 PDGFCQ9NRA1 345 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 ADD3Q9UEY8 706 aaKnown RBP17.13■□□□□ 0.33
HSPG2-214ENST00000635682 TBX21Q9UL17 535 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 MRPL11Q9Y3B7 192 aaKnown RBP17.13■□□□□ 0.33
HSPG2-214ENST00000635682 CYP46A1Q9Y6A2 500 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 ASTN1O14525 1302 aa17.13■□□□□ 0.33
HSPG2-214ENST00000635682 A0A0U1RQG5 324 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-214ENST00000635682 PALM3A6NDB9 673 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-214ENST00000635682 ASB14A6NK59 587 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 ARVCFO00192 962 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 ZBTB5O15062 677 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 ZBTB43O43298 467 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 TROAPQ12815 778 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 TMEM63BQ5T3F8 832 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 RNF207Q6ZRF8 634 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 MYLIPQ8WY64 445 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 TCEANC2Q96MN5 208 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 SENP2Q9HC62 589 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 RBM28Q9NW13 759 aaKnown RBP17.12■□□□□ 0.33
HSPG2-214ENST00000635682 CYP39A1Q9NYL5 469 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 UNC80Q8N2C7 3258 aa17.12■□□□□ 0.33
HSPG2-214ENST00000635682 MYO9BQ13459 2157 aa17.11■□□□□ 0.33
HSPG2-214ENST00000635682 KLF18A0A0U1RQI7 1052 aa17.11■□□□□ 0.33
HSPG2-214ENST00000635682 DYNC1LI2O43237 492 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-214ENST00000635682 CALML3P27482 149 aa17.11■□□□□ 0.33
HSPG2-214ENST00000635682 CXCL17Q6UXB2 119 aa17.11■□□□□ 0.33
HSPG2-214ENST00000635682 Q6ZUG5 572 aa17.11■□□□□ 0.33
HSPG2-214ENST00000635682 SGMS1Q86VZ5 419 aa17.11■□□□□ 0.33
HSPG2-214ENST00000635682 FBXO16Q8IX29 292 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-214ENST00000635682 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
HSPG2-214ENST00000635682 KCNB2Q92953 911 aa17.11■□□□□ 0.33
HSPG2-214ENST00000635682 JMJD4Q9H9V9 463 aa17.11■□□□□ 0.33
HSPG2-214ENST00000635682 GPHNQ9NQX3 736 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-214ENST00000635682 GNEQ9Y223 722 aaKnown RBP17.11■□□□□ 0.33
HSPG2-214ENST00000635682 CCDC196A0A1B0GTZ2 297 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 GOLGA8AA7E2F4 631 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 SMPD1P17405 629 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 RXRAP19793 462 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 RPS6KB1P23443 525 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 EXOSC10Q01780 885 aaKnown RBP17.1■□□□□ 0.33
HSPG2-214ENST00000635682 MFSD5Q6N075 450 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 C16orf59Q7L2K0 433 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 TLK2Q86UE8 772 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.1■□□□□ 0.332e-7■■■□□ 17.5
HSPG2-214ENST00000635682 FANCBQ8NB91 859 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.33
HSPG2-214ENST00000635682 PPP1R12CQ9BZL4 782 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 UPF2Q9HAU5 1272 aaKnown RBP17.1■□□□□ 0.33
HSPG2-214ENST00000635682 PCDHA1Q9Y5I3 950 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 MROH7Q68CQ1 1323 aa17.1■□□□□ 0.33
HSPG2-214ENST00000635682 LCTP09848 1927 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 ACRP10323 421 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 CSF2RAP15509 400 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 BAATQ14032 418 aaPredicted RBP17.09■□□□□ 0.33
HSPG2-214ENST00000635682 RTN1Q16799 776 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 TAPT1Q6NXT6 567 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 APOA5Q6Q788 366 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 RUFY3Q7L099 469 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 FAM126BQ8IXS8 530 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 BRF1Q92994 677 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 PIGSQ96S52 555 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 SPZ1Q9BXG8 430 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 MAF1Q9H063 256 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 AP5M1Q9H0R1 490 aa17.09■□□□□ 0.33
HSPG2-214ENST00000635682 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-214ENST00000635682 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-214ENST00000635682 NFIBO00712 420 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 TLR3O15455 904 aaKnown RBP17.08■□□□□ 0.32
HSPG2-214ENST00000635682 CPA1P15085 419 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 SMARCA1P28370 1054 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 CYP2C18P33260 490 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 METAP2P50579 478 aaKnown RBP eCLIP17.08■□□□□ 0.322e-8■■■■□ 19.3
HSPG2-214ENST00000635682 NKX3-2P78367 333 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 PPIGQ13427 754 aaKnown RBP eCLIP17.08■□□□□ 0.32
HSPG2-214ENST00000635682 PPP2R5BQ15173 497 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 FSCN1Q16658 493 aaKnown RBP17.08■□□□□ 0.32
HSPG2-214ENST00000635682 IQSEC1Q6DN90 963 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 MAFAQ8NHW3 353 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-214ENST00000635682 CUL5Q93034 780 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 RIOX1Q9H6W3 641 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 EYSQ5T1H1 3165 aa17.08■□□□□ 0.32
HSPG2-214ENST00000635682 GRXCR1A8MXD5 290 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 CFBP00751 764 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 RCAN1P53805 252 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 ANAPC15P60006 121 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 PSMC6P62333 389 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 AKAP17AQ02040 695 aaKnown RBP17.07■□□□□ 0.32
HSPG2-214ENST00000635682 ITGA7Q13683 1181 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 TMEM240Q5SV17 173 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 CCDC82Q8N4S0 544 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 TMEM199Q8N511 208 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 PDRG1Q9NUG6 133 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 LRRC37A2A6NM11 1700 aa17.07■□□□□ 0.32
HSPG2-214ENST00000635682 PRUNE2Q8WUY3 3088 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms