RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 GJA9P57773 515 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 GHRHRQ02643 423 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 PPP2R5BQ15173 497 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 STXBP2Q15833 593 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 LRRC26Q2I0M4 334 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 TSEN34Q9BSV6 310 aaKnown RBP24.08■■□□□ 1.45
SF1-221ENST00000633899 TM6SF1Q9BZW5 370 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 ZSWIM6Q9HCJ5 1215 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 PXMP2Q9NR77 195 aa24.08■■□□□ 1.45
SF1-221ENST00000633899 MOXD2PA6NHM9 499 aa24.07■■□□□ 1.44
SF1-221ENST00000633899 GNASQ5JWF2 1037 aa24.07■■□□□ 1.44
SF1-221ENST00000633899 FCHSD1Q86WN1 690 aa24.07■■□□□ 1.44
SF1-221ENST00000633899 FBXL16Q8N461 479 aa24.07■■□□□ 1.44
SF1-221ENST00000633899 SCFD2Q8WU76 684 aa24.07■■□□□ 1.44
SF1-221ENST00000633899 WDR11Q9BZH6 1224 aa24.07■■□□□ 1.44
SF1-221ENST00000633899 UPF3AQ9H1J1 476 aaKnown RBP24.07■■□□□ 1.44
SF1-221ENST00000633899 CNTNAP5Q8WYK1 1306 aa24.07■■□□□ 1.44
SF1-221ENST00000633899 hCG_1642624A0A1W2PR95 340 aa24.06■■□□□ 1.44
SF1-221ENST00000633899 DYNC1LI2O43237 492 aaPredicted RBP24.06■■□□□ 1.44
SF1-221ENST00000633899 CST5P28325 142 aaPredicted RBP24.06■■□□□ 1.44
SF1-221ENST00000633899 KCNA10Q16322 511 aa24.06■■□□□ 1.44
SF1-221ENST00000633899 DUSP28Q4G0W2 176 aa24.06■■□□□ 1.44
SF1-221ENST00000633899 HEATR3Q7Z4Q2 680 aa24.06■■□□□ 1.44
SF1-221ENST00000633899 KLHDC9Q8NEP7 349 aa24.06■■□□□ 1.44
SF1-221ENST00000633899 SMARCC2Q8TAQ2 1214 aa24.06■■□□□ 1.44
SF1-221ENST00000633899 GNEQ9Y223 722 aaKnown RBP24.06■■□□□ 1.44
SF1-221ENST00000633899 A0A1W2PQ45 241 aaPredicted RBP24.05■■□□□ 1.44
SF1-221ENST00000633899 A0A1W2PQY0 241 aa24.05■■□□□ 1.44
SF1-221ENST00000633899 MYADML2A6NDP7 307 aa24.05■■□□□ 1.44
SF1-221ENST00000633899 ACLYP53396 1101 aa24.05■■□□□ 1.44
SF1-221ENST00000633899 TTLL4Q14679 1199 aa24.05■■□□□ 1.44
SF1-221ENST00000633899 SLC39A5Q6ZMH5 540 aa24.05■■□□□ 1.44
SF1-221ENST00000633899 SEPT14Q6ZU15 432 aa24.05■■□□□ 1.44
SF1-221ENST00000633899 AGXT2Q9BYV1 514 aa24.05■■□□□ 1.44
SF1-221ENST00000633899 UPF3BQ9BZI7 483 aaKnown RBP24.05■■□□□ 1.44
SF1-221ENST00000633899 STARD7Q9NQZ5 370 aa24.05■■□□□ 1.44
SF1-221ENST00000633899 Q9Y3F1 56 aa24.05■■□□□ 1.44
SF1-221ENST00000633899 RBM47A0AV96 593 aaKnown RBP24.04■■□□□ 1.44
SF1-221ENST00000633899 ZEB2O60315 1214 aa24.04■■□□□ 1.44
SF1-221ENST00000633899 NR3C2P08235 984 aa24.04■■□□□ 1.44
SF1-221ENST00000633899 MYCLP12524 364 aaPredicted RBP24.04■■□□□ 1.44
SF1-221ENST00000633899 CDC27P30260 824 aa24.04■■□□□ 1.44
SF1-221ENST00000633899 RTP1P59025 263 aa24.04■■□□□ 1.44
SF1-221ENST00000633899 FSCN1Q16658 493 aaKnown RBP24.04■■□□□ 1.44
SF1-221ENST00000633899 VTI1AQ96AJ9 217 aa24.04■■□□□ 1.44
SF1-221ENST00000633899 GLT1D1Q96MS3 346 aa24.04■■□□□ 1.44
SF1-221ENST00000633899 ATP11BQ9Y2G3 1177 aa24.04■■□□□ 1.44
SF1-221ENST00000633899 NKRFO15226 690 aaKnown RBP eCLIP24.03■■□□□ 1.442e-6■■■□□ 17.1
SF1-221ENST00000633899 EIF3JO75822 258 aaKnown RBP24.03■■□□□ 1.44
SF1-221ENST00000633899 ASGR1P07306 291 aa24.03■■□□□ 1.44
SF1-221ENST00000633899 TXNP10599 105 aaKnown RBP24.03■■□□□ 1.44
SF1-221ENST00000633899 ANAPC15P60006 121 aa24.03■■□□□ 1.44
SF1-221ENST00000633899 BEX3Q00994 111 aa24.03■■□□□ 1.44
SF1-221ENST00000633899 OR6J1Q8NGC5 347 aa24.03■■□□□ 1.44
SF1-221ENST00000633899 GPKOWQ92917 476 aaPredicted RBP eCLIP24.03■■□□□ 1.443e-7■■□□□ 13
SF1-221ENST00000633899 PDCD2LQ9BRP1 358 aa24.03■■□□□ 1.44
SF1-221ENST00000633899 PDRG1Q9NUG6 133 aa24.03■■□□□ 1.44
SF1-221ENST00000633899 V9GY48 417 aaPredicted RBP24.03■■□□□ 1.44
SF1-221ENST00000633899 CCND2P30279 289 aa24.02■■□□□ 1.44
SF1-221ENST00000633899 ADD1P35611 737 aaKnown RBP24.02■■□□□ 1.44
SF1-221ENST00000633899 IRX5P78411 483 aaPredicted RBP24.02■■□□□ 1.44
SF1-221ENST00000633899 PGM5Q15124 567 aa24.02■■□□□ 1.44
SF1-221ENST00000633899 BRDTQ58F21 947 aaPredicted RBP24.02■■□□□ 1.44
SF1-221ENST00000633899 PSTPIP2Q9H939 334 aa24.02■■□□□ 1.44
SF1-221ENST00000633899 ZMYND8Q9ULU4 1186 aaPredicted RBP24.02■■□□□ 1.44
SF1-221ENST00000633899 CEP290O15078 2479 aa24.02■■□□□ 1.44
SF1-221ENST00000633899 NID2Q14112 1375 aa24.02■■□□□ 1.44
SF1-221ENST00000633899 hCG_1984214I3L0E3 225 aa24.01■■□□□ 1.43
SF1-221ENST00000633899 NAPAP54920 295 aa24.01■■□□□ 1.43
SF1-221ENST00000633899 NKX3-2P78367 333 aa24.01■■□□□ 1.43
SF1-221ENST00000633899 AKAP17AQ02040 695 aaKnown RBP24.01■■□□□ 1.43
SF1-221ENST00000633899 TMEM63BQ5T3F8 832 aa24.01■■□□□ 1.43
SF1-221ENST00000633899 CCSAPQ6IQ19 270 aaPredicted RBP24.01■■□□□ 1.43
SF1-221ENST00000633899 USP17L6PQ6QN14 398 aa24.01■■□□□ 1.43
SF1-221ENST00000633899 ZNF713Q8N859 430 aaPredicted RBP24.01■■□□□ 1.43
SF1-221ENST00000633899 FAM217BQ9NTX9 383 aaPredicted RBP24.01■■□□□ 1.43
SF1-221ENST00000633899 PRKAG2Q9UGJ0 569 aa24.01■■□□□ 1.43
SF1-221ENST00000633899 PIK3CDO00329 1044 aa24■■□□□ 1.43
SF1-221ENST00000633899 SYN1P17600 705 aa24■■□□□ 1.43
SF1-221ENST00000633899 PTGS1P23219 599 aa24■■□□□ 1.43
SF1-221ENST00000633899 CPT1AP50416 773 aa24■■□□□ 1.43
SF1-221ENST00000633899 FUT2Q10981 343 aa24■■□□□ 1.43
SF1-221ENST00000633899 TOB2Q14106 344 aaPredicted RBP24■■□□□ 1.43
SF1-221ENST00000633899 SNX17Q15036 470 aa24■■□□□ 1.43
SF1-221ENST00000633899 TRIM60Q495X7 471 aa24■■□□□ 1.43
SF1-221ENST00000633899 WWC2Q6AWC2 1192 aa24■■□□□ 1.43
SF1-221ENST00000633899 RBM27Q9P2N5 1060 aaKnown RBP24■■□□□ 1.43
SF1-221ENST00000633899 MRVI1Q9Y6F6 885 aa24■■□□□ 1.43
SF1-221ENST00000633899 CTAGE5O15320 804 aa23.99■■□□□ 1.43
SF1-221ENST00000633899 PDIA3P30101 505 aaKnown RBP23.99■■□□□ 1.43
SF1-221ENST00000633899 CCT2P78371 535 aaKnown RBP23.99■■□□□ 1.43
SF1-221ENST00000633899 PPP1R18Q6NYC8 613 aa23.99■■□□□ 1.43
SF1-221ENST00000633899 MYH7BA7E2Y1 1941 aa23.99■■□□□ 1.43
SF1-221ENST00000633899 ELP1O95163 1332 aa23.99■■□□□ 1.43
SF1-221ENST00000633899 DNAH12Q6ZR08 3092 aa23.99■■□□□ 1.43
SF1-221ENST00000633899 SPDYE3A6NKU9 549 aa23.98■■□□□ 1.43
SF1-221ENST00000633899 MEIS2O14770 477 aa23.98■■□□□ 1.43
SF1-221ENST00000633899 CABYRO75952 493 aa23.98■■□□□ 1.43
SF1-221ENST00000633899 EVCP57679 992 aa23.98■■□□□ 1.43
SF1-221ENST00000633899 C1orf53Q5VUE5 145 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms