RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 ARHGAP4P98171 946 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 TTC38Q5R3I4 469 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 PLEKHH3Q7Z736 793 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 IL31RAQ8NI17 732 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 ZNF396Q96N95 335 aaPredicted RBP16.84■□□□□ 0.29
LIMS4-203ENST00000632758 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
LIMS4-203ENST00000632758 ASTN1O14525 1302 aa16.83■□□□□ 0.29
LIMS4-203ENST00000632758 PFASO15067 1338 aa16.83■□□□□ 0.29
LIMS4-203ENST00000632758 RPTORQ8N122 1335 aa16.83■□□□□ 0.29
LIMS4-203ENST00000632758 DNAJC25-GNG10A0A024R161 153 aa16.83■□□□□ 0.28
LIMS4-203ENST00000632758 COBLO75128 1261 aa16.83■□□□□ 0.28
LIMS4-203ENST00000632758 TDP2O95551 362 aa16.83■□□□□ 0.28
LIMS4-203ENST00000632758 TRAPPC10P48553 1259 aa16.83■□□□□ 0.28
LIMS4-203ENST00000632758 SF3A1Q15459 793 aaKnown RBP16.83■□□□□ 0.28
LIMS4-203ENST00000632758 ARHGEF16Q5VV41 709 aa16.83■□□□□ 0.28
LIMS4-203ENST00000632758 ANO1Q5XXA6 986 aa16.83■□□□□ 0.28
LIMS4-203ENST00000632758 FAM133AQ8N9E0 248 aa16.83■□□□□ 0.28
LIMS4-203ENST00000632758 CFHR5Q9BXR6 569 aa16.83■□□□□ 0.28
LIMS4-203ENST00000632758 MAF1Q9H063 256 aa16.83■□□□□ 0.28
LIMS4-203ENST00000632758 STRNO43815 780 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 CCNT1O60563 726 aaKnown RBP16.82■□□□□ 0.28
LIMS4-203ENST00000632758 ADORA2AP29274 412 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 MCM7P33993 719 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 USP11P51784 963 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 KRT85P78386 507 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 CAP1Q01518 475 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 FGD4Q96M96 766 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 PDCD2LQ9BRP1 358 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 ARHGAP39Q9C0H5 1083 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.82■□□□□ 0.28
LIMS4-203ENST00000632758 RTEL1Q9NZ71 1219 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 MRVI1Q9Y6F6 885 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 IVNS1ABPQ9Y6Y0 642 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 PCNTO95613 3336 aa16.82■□□□□ 0.28
LIMS4-203ENST00000632758 CYP3A4P08684 503 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 GRB14Q14449 540 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 PGM5Q15124 567 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 PTPAQ15257 358 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 CYP2W1Q8TAV3 490 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 NSUN6Q8TEA1 469 aaKnown RBP16.81■□□□□ 0.28
LIMS4-203ENST00000632758 FRMPD4Q14CM0 1322 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 FAM86B1E9PN63 330 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 FIBPO43427 364 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 NR3C2P08235 984 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 FAM86B2P0C5J1 330 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 MYCLP12524 364 aaPredicted RBP16.81■□□□□ 0.28
LIMS4-203ENST00000632758 NASPP49321 788 aaPredicted RBP16.81■□□□□ 0.28
LIMS4-203ENST00000632758 MRPS9P82933 396 aaKnown RBP16.81■□□□□ 0.28
LIMS4-203ENST00000632758 LACTBP83111 547 aaPredicted RBP16.81■□□□□ 0.28
LIMS4-203ENST00000632758 SP3Q02447 781 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 ZNF792Q3KQV3 632 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 ATL3Q6DD88 541 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 ABRAQ8N0Z2 381 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 EHMT1Q9H9B1 1298 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 POLR3EQ9NVU0 708 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 CFAP45Q9UL16 551 aa16.81■□□□□ 0.28
LIMS4-203ENST00000632758 SLC15A5A6NIM6 579 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 SLC37A4O43826 429 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 ZNF76P36508 570 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 PSMC4P43686 418 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 ALDH5A1P51649 535 aaPredicted RBP16.8■□□□□ 0.28
LIMS4-203ENST00000632758 MORN1Q5T089 497 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 C4orf32Q8N8J7 132 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 LINC00301Q8NCQ3 95 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 DNERQ8NFT8 737 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
LIMS4-203ENST00000632758 UIMC1Q96RL1 719 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 TMEM60Q9H2L4 133 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 TSKSQ9UJT2 592 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
LIMS4-203ENST00000632758 THSD7BQ9C0I4 1608 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 CYP3A7-CYP3A51PA0A087WV96 503 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 GPR25O00155 361 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 TNPO2O14787 897 aaKnown RBP16.79■□□□□ 0.28
LIMS4-203ENST00000632758 CYP3A7P24462 503 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 CIITAP33076 1130 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 MAP2K1Q02750 393 aaPredicted RBP16.79■□□□□ 0.28
LIMS4-203ENST00000632758 PTGDRQ13258 359 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 SLC39A14Q15043 492 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 STK38Q15208 465 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 PCNX4Q63HM2 1172 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 PPP4R3AQ6IN85 833 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 DPP9Q86TI2 863 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 VSIG10LQ86VR7 867 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 NPLOC4Q8TAT6 608 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 MBOAT7Q96N66 472 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 DDX25Q9UHL0 483 aaKnown RBP16.79■□□□□ 0.28
LIMS4-203ENST00000632758 GJD2Q9UKL4 321 aa16.79■□□□□ 0.28
LIMS4-203ENST00000632758 MARCKSP29966 332 aaPredicted RBP16.78■□□□□ 0.28
LIMS4-203ENST00000632758 PRR16Q569H4 304 aa16.78■□□□□ 0.28
LIMS4-203ENST00000632758 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
LIMS4-203ENST00000632758 SPATA32Q96LK8 384 aa16.78■□□□□ 0.28
LIMS4-203ENST00000632758 GBP4Q96PP9 640 aa16.78■□□□□ 0.28
LIMS4-203ENST00000632758 SAGE1Q9NXZ1 904 aa16.78■□□□□ 0.28
LIMS4-203ENST00000632758 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
LIMS4-203ENST00000632758 IGLV3-22A0A075B6J6 115 aa16.77■□□□□ 0.28
LIMS4-203ENST00000632758 YEATS4O95619 227 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms