RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 FCRL3Q96P31 734 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 NOL6Q9H6R4 1146 aaKnown RBP4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 IMPACTQ9P2X3 320 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 MINPP1Q9UNW1 487 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 BACE2Q9Y5Z0 518 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 SH3D21A4FU49 640 aa4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 FAM86C2PA6NEL3 165 aa4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 TP53P04637 393 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CD3EP07766 207 aa4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ATF4P18848 351 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ZNF200P98182 395 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 KLHL6Q8WZ60 621 aa4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 RNF38Q9H0F5 515 aa4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CGGBP1Q9UFW8 167 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 A0A1W2PQJ5 194 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 FZD7O75084 574 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 EPHX1P07099 455 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 TGM1P22735 817 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 SEPHS1P49903 392 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 FOXO4P98177 505 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 MVKQ03426 396 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 SLC9A5Q14940 896 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PLEKHN1Q494U1 663 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 VHLLQ6RSH7 139 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 NETO2Q8NC67 525 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 SH3RF3Q8TEJ3 882 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 BRF1Q92994 677 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 DVL3Q92997 716 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 EPN3Q9H201 632 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 WDR26Q9H7D7 661 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 NUDT5Q9UKK9 219 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PMF1-BGLAPU3KQ54 211 aa4.77□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 UNCXA6NJT0 531 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ZBTB7AO95365 584 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 DBHP09172 617 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 TCF3P15923 654 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PAMP19021 973 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 GJA9P57773 515 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 HTRA3P83110 453 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 DLX2Q07687 328 aaPredicted RBP4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PPP2R5EQ16537 467 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 USP51Q70EK9 711 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 TSPAN17Q96FV3 270 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ZDHHC15Q96MV8 337 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 APBA2Q99767 749 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PCED1AQ9H1Q7 454 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ACBD3Q9H3P7 528 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PCDH18Q9HCL0 1135 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 SUGT1Q9Y2Z0 365 aa4.76□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 NOP56O00567 594 aaKnown RBP4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 IFNGR1P15260 489 aa4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ERCC5P28715 1186 aaPredicted RBP4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 E4F1Q66K89 784 aaPredicted RBP4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 IQCEQ6IPM2 695 aa4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 KIAA1211LQ6NV74 962 aa4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ADAT2Q7Z6V5 191 aaKnown RBP4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 CARFQ8N187 725 aa4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 BVESQ8NE79 360 aa4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 CHST13Q8NET6 341 aa4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 MMP19Q99542 508 aa4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PRKAG3Q9UGI9 489 aa4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 EMC9Q9Y3B6 208 aa4.75□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 C2orf71A6NGG8 1288 aa4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 SSBP05455 408 aaKnown RBP eCLIP4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ATF2P15336 505 aa4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 TBC1D10BQ4KMP7 808 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 TRIM59Q8IWR1 403 aa4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ZNF513Q8N8E2 541 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 COPS5Q92905 334 aa4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PEX11GQ96HA9 241 aa4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 CCDC140Q96MF4 163 aa4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ACTR10Q9NZ32 417 aa4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 AKT3Q9Y243 479 aa4.74□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 NPHS1O60500 1241 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PLATP00750 562 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 GLI4P10075 376 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 GTF2A2P52657 109 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PPP2R5DQ14738 602 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 TESK1Q15569 626 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 BICRALQ6AI39 1079 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 LZTR1Q8N653 840 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 SLC43A3Q8NBI5 491 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 ADCY4Q8NFM4 1077 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 CPA5Q8WXQ8 436 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 CYP26B1Q9NR63 512 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 PLA2G2DQ9UNK4 145 aa4.73□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 NPHP3-ACAD11A0A0J9YXS1 232 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 STXBP3O00186 592 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 CPP00450 1065 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 NCAM1P13591 858 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 KCNAB2Q13303 367 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 FXNQ16595 210 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 C9orf131Q5VYM1 1079 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 DCP2Q8IU60 420 aaKnown RBP4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 FAM169BQ8N8A8 192 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 MRGPRX3Q96LB0 322 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 FGD4Q96M96 766 aa4.72□□□□□ -1.65
NPHP3-ACAD11-202ENST00000632629 GMLQ99445 158 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms