RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 NFRKBQ6P4R8 1299 aa13.05□□□□□ -0.32
CCDC163-208ENST00000629670 PLEKHM2Q8IWE5 1019 aa13.05□□□□□ -0.32
CCDC163-208ENST00000629670 NSUN6Q8TEA1 469 aaKnown RBP13.05□□□□□ -0.32
CCDC163-208ENST00000629670 ZSCAN10Q96SZ4 725 aaPredicted RBP13.05□□□□□ -0.32
CCDC163-208ENST00000629670 UBAC1Q9BSL1 405 aa13.05□□□□□ -0.32
CCDC163-208ENST00000629670 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
CCDC163-208ENST00000629670 PRDM12Q9H4Q4 367 aa13.05□□□□□ -0.32
CCDC163-208ENST00000629670 TRMT13Q9NUP7 481 aaKnown RBP13.05□□□□□ -0.32
CCDC163-208ENST00000629670 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
CCDC163-208ENST00000629670 MRPL11Q9Y3B7 192 aaKnown RBP13.05□□□□□ -0.32
CCDC163-208ENST00000629670 NEDD4P46934 1319 aa13.05□□□□□ -0.32
CCDC163-208ENST00000629670 UMODL1Q5DID0 1318 aa13.05□□□□□ -0.32
CCDC163-208ENST00000629670 UNC80Q8N2C7 3258 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 A6NJR5 290 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 CYP2C9P11712 490 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 IGFBP4P22692 258 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 RFC2P35250 354 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 BFSP2Q13515 415 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 STXBP2Q15833 593 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 FBXO11Q86XK2 927 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 CCDC155Q8N6L0 562 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 PPM1EQ8WY54 764 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 ANKS1AQ92625 1134 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 SCLYQ96I15 445 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 YTHDC1Q96MU7 727 aaKnown RBP13.04□□□□□ -0.32
CCDC163-208ENST00000629670 IWS1Q96ST2 819 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
CCDC163-208ENST00000629670 NKX2-4Q9H2Z4 354 aa13.04□□□□□ -0.32
CCDC163-208ENST00000629670 B4E1Z4 1266 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 GH1P01241 217 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 ATP2A2P16615 1042 aaKnown RBP13.03□□□□□ -0.32
CCDC163-208ENST00000629670 CHMP4BP1P59074 171 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 TRDNQ13061 729 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 TRAF1Q13077 416 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 TJAP1Q5JTD0 557 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 ARHGEF16Q5VV41 709 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 ADGRF4Q8IZF3 695 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 RMDN3Q96TC7 470 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC163-208ENST00000629670 VAT1LQ9HCJ6 419 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 ZSWIM5Q9P217 1185 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 PCDHA11Q9Y5I1 949 aa13.03□□□□□ -0.32
CCDC163-208ENST00000629670 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
CCDC163-208ENST00000629670 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.33
CCDC163-208ENST00000629670 IFIT1BQ5T764 474 aaKnown RBP13.02□□□□□ -0.33
CCDC163-208ENST00000629670 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.33
CCDC163-208ENST00000629670 SEPT14Q6ZU15 432 aa13.02□□□□□ -0.33
CCDC163-208ENST00000629670 DEFB128Q7Z7B8 93 aa13.02□□□□□ -0.33
CCDC163-208ENST00000629670 ENAHQ8N8S7 591 aaPredicted RBP13.02□□□□□ -0.33
CCDC163-208ENST00000629670 IL27Q8NEV9 243 aa13.02□□□□□ -0.33
CCDC163-208ENST00000629670 SYTL5Q8TDW5 730 aaPredicted RBP13.02□□□□□ -0.33
CCDC163-208ENST00000629670 COPS5Q92905 334 aa13.02□□□□□ -0.33
CCDC163-208ENST00000629670 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
CCDC163-208ENST00000629670 LRRC37A2A6NM11 1700 aa13.02□□□□□ -0.33
CCDC163-208ENST00000629670 KIF28PB7ZC32 967 aa13.01□□□□□ -0.33
CCDC163-208ENST00000629670 EIF3JO75822 258 aaKnown RBP13.01□□□□□ -0.33
CCDC163-208ENST00000629670 IGHDP01880 384 aa13.01□□□□□ -0.33
CCDC163-208ENST00000629670 QRICH1Q2TAL8 776 aa13.01□□□□□ -0.33
CCDC163-208ENST00000629670 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
CCDC163-208ENST00000629670 ATXN2LQ8WWM7 1075 aaKnown RBP13.01□□□□□ -0.33
CCDC163-208ENST00000629670 TAAR1Q96RJ0 339 aa13.01□□□□□ -0.33
CCDC163-208ENST00000629670 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
CCDC163-208ENST00000629670 YBX2Q9Y2T7 364 aaKnown RBP13.01□□□□□ -0.33
CCDC163-208ENST00000629670 ERICH2A1L162 156 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 CFBP00751 764 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 IQCF3P0C7M6 154 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 RABGGTBP53611 331 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 PTGISQ16647 500 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 DGKDQ16760 1214 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 CCDC62Q6P9F0 684 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 CHST3Q7LGC8 479 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 USP38Q8NB14 1042 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 CAGE1Q8TC20 777 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 PHOSPHO2Q8TCD6 241 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 AFG1LQ8WV93 481 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 RUFY2Q8WXA3 655 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 SLC9A7Q96T83 725 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 KATNAL1Q9BW62 490 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 JMJD4Q9H9V9 463 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 MAP3K20Q9NYL2 800 aaKnown RBP13□□□□□ -0.33
CCDC163-208ENST00000629670 THEGQ9P2T0 379 aa13□□□□□ -0.33
CCDC163-208ENST00000629670 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
CCDC163-208ENST00000629670 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
CCDC163-208ENST00000629670 ARIH2O95376 493 aa12.99□□□□□ -0.33
CCDC163-208ENST00000629670 PARNO95453 639 aaKnown RBP12.99□□□□□ -0.33
CCDC163-208ENST00000629670 MMP3P08254 477 aa12.99□□□□□ -0.33
CCDC163-208ENST00000629670 EIF2AK2P19525 551 aaKnown RBP12.99□□□□□ -0.33
CCDC163-208ENST00000629670 KCNJ6P48051 423 aa12.99□□□□□ -0.33
CCDC163-208ENST00000629670 MRPS5P82675 430 aaKnown RBP12.99□□□□□ -0.33
CCDC163-208ENST00000629670 LAMC2Q13753 1193 aa12.99□□□□□ -0.33
CCDC163-208ENST00000629670 CCDC85BQ15834 202 aaPredicted RBP12.99□□□□□ -0.33
CCDC163-208ENST00000629670 LY6KQ17RY6 165 aa12.99□□□□□ -0.33
CCDC163-208ENST00000629670 KCNV1Q6PIU1 500 aa12.99□□□□□ -0.33
CCDC163-208ENST00000629670 DHX37Q8IY37 1157 aaKnown RBP12.99□□□□□ -0.33
CCDC163-208ENST00000629670 SAMD3Q8N6K7 520 aa12.99□□□□□ -0.33
CCDC163-208ENST00000629670 C7orf31Q8N865 590 aa12.99□□□□□ -0.33
CCDC163-208ENST00000629670 AFAP1L1Q8TED9 768 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms