RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 SUGT1Q9Y2Z0 365 aa5.15□□□□□ -1.59
PTP4A2-220ENST00000627328 MSL3P1P0C860 447 aa5.14□□□□□ -1.59
PTP4A2-220ENST00000627328 PAMP19021 973 aa5.14□□□□□ -1.59
PTP4A2-220ENST00000627328 TGM1P22735 817 aa5.14□□□□□ -1.59
PTP4A2-220ENST00000627328 IGDCC3Q8IVU1 814 aa5.14□□□□□ -1.59
PTP4A2-220ENST00000627328 BVESQ8NE79 360 aa5.14□□□□□ -1.59
PTP4A2-220ENST00000627328 FGD4Q96M96 766 aa5.14□□□□□ -1.59
PTP4A2-220ENST00000627328 USP40Q9NVE5 1235 aa5.14□□□□□ -1.59
PTP4A2-220ENST00000627328 SUSD2Q9UGT4 822 aa5.14□□□□□ -1.59
PTP4A2-220ENST00000627328 NPHP3-ACAD11A0A0J9YXS1 232 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 STXBP3O00186 592 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 NOP56O00567 594 aaKnown RBP5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 GLI4P10075 376 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 ERCC5P28715 1186 aaPredicted RBP5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 SLC9A5Q14940 896 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 LZTR1Q8N653 840 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 FAM169BQ8N8A8 192 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 ZNF513Q8N8E2 541 aaPredicted RBP5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 NETO2Q8NC67 525 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 ANAPC16Q96DE5 110 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 NUDT5Q9UKK9 219 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 AKT3Q9Y243 479 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 EMC9Q9Y3B6 208 aa5.13□□□□□ -1.59
PTP4A2-220ENST00000627328 F8W031 263 aaPredicted RBP5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 BUB1BO60566 1050 aaPredicted RBP5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 FZD7O75084 574 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 VAMP4O75379 141 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 ZBTB7AO95365 584 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 ITGB3P05106 788 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 IGFBP6P24592 240 aaPredicted RBP5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 SLURP1P55000 103 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 TTC9BQ8N6N2 239 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 COPS5Q92905 334 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 PEX11GQ96HA9 241 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 MMP19Q99542 508 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 MCMBPQ9BTE3 642 aa5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.12□□□□□ -1.593e-7■■□□□ 13.4
PTP4A2-220ENST00000627328 DBR1Q9UK59 544 aaKnown RBP5.12□□□□□ -1.59
PTP4A2-220ENST00000627328 NPHS1O60500 1241 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 SSBP05455 408 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 NCAM1P13591 858 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 TCF3P15923 654 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 ZNF20P17024 532 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 PRR5P85299 388 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 ZNF200P98182 395 aaPredicted RBP5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 DPY19L1Q2PZI1 675 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 IQCEQ6IPM2 695 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 FERMT3Q86UX7 667 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 TSPAN17Q96FV3 270 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 CYP26B1Q9NR63 512 aa5.11□□□□□ -1.59
PTP4A2-220ENST00000627328 FBLN1P23142 703 aa5.1□□□□□ -1.59
PTP4A2-220ENST00000627328 TRIM59Q8IWR1 403 aa5.1□□□□□ -1.59
PTP4A2-220ENST00000627328 Q8N1X5 172 aa5.1□□□□□ -1.59
PTP4A2-220ENST00000627328 CPA5Q8WXQ8 436 aa5.1□□□□□ -1.59
PTP4A2-220ENST00000627328 CCDC140Q96MF4 163 aa5.1□□□□□ -1.59
PTP4A2-220ENST00000627328 ACTR10Q9NZ32 417 aa5.1□□□□□ -1.59
PTP4A2-220ENST00000627328 APEX2Q9UBZ4 518 aa5.1□□□□□ -1.59
PTP4A2-220ENST00000627328 PRKAG3Q9UGI9 489 aa5.1□□□□□ -1.59
PTP4A2-220ENST00000627328 C7orf72A4D263 438 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 SMAD7O15105 426 aaKnown RBP5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 KCNH1O95259 989 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 TACR1P25103 407 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 HOXC12P31275 282 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 FXNQ16595 210 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 E4F1Q66K89 784 aaPredicted RBP5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 FAM178BQ8IXR5 827 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 USP33Q8TEY7 942 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 MRGPRX3Q96LB0 322 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 MTA3Q9BTC8 594 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 EPN3Q9H201 632 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 NKX2-4Q9H2Z4 354 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 PCDH18Q9HCL0 1135 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 FAN1Q9Y2M0 1017 aa5.09□□□□□ -1.59
PTP4A2-220ENST00000627328 FFAR3O14843 346 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 PLS3P13797 630 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 FOXO4P98177 505 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 ARID5AQ03989 594 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 SCRN1Q12765 414 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 WWC2Q6AWC2 1192 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 GTF2IRD2BQ6EKJ0 949 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 CRIP3Q6Q6R5 217 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 GTF2IRD2Q86UP8 949 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 CPNE8Q86YQ8 564 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 SAMD11Q96NU1 681 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 PCED1AQ9H1Q7 454 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 RWDD3Q9Y3V2 267 aa5.08□□□□□ -1.6
PTP4A2-220ENST00000627328 CPP00450 1065 aa5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 SCG5P05408 212 aa5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 ASGR2P07307 311 aa5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 GTF2A2P52657 109 aa5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 NCKAP1LP55160 1127 aa5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 TESK1Q15569 626 aa5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 NT5DC1Q5TFE4 455 aa5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 C6orf15Q6UXA7 325 aaPredicted RBP5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 B3GNT8Q7Z7M8 397 aa5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 DCP2Q8IU60 420 aaKnown RBP5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 SLC43A3Q8NBI5 491 aa5.07□□□□□ -1.6
PTP4A2-220ENST00000627328 ALG3Q92685 438 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms