RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
TCF4-253ENST00000626466 PI4K2BQ8TCG2 481 aa12.54□□□□□ -0.4
TCF4-253ENST00000626466 DHX38Q92620 1227 aaKnown RBP12.54□□□□□ -0.4
TCF4-253ENST00000626466 SLC9A7Q96T83 725 aa12.54□□□□□ -0.4
TCF4-253ENST00000626466 SEZ6LQ9BYH1 1024 aa12.54□□□□□ -0.4
TCF4-253ENST00000626466 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
TCF4-253ENST00000626466 POLR3EQ9NVU0 708 aa12.54□□□□□ -0.4
TCF4-253ENST00000626466 SCN10AQ9Y5Y9 1956 aa12.53□□□□□ -0.4
TCF4-253ENST00000626466 PTPDC1A2A3K4 754 aa12.53□□□□□ -0.4
TCF4-253ENST00000626466 SUPT20HL2P0C7V6 817 aa12.53□□□□□ -0.4
TCF4-253ENST00000626466 CALML3P27482 149 aa12.53□□□□□ -0.4
TCF4-253ENST00000626466 NOVP48745 357 aa12.53□□□□□ -0.4
TCF4-253ENST00000626466 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.4
TCF4-253ENST00000626466 DEFB103AP81534 67 aa12.53□□□□□ -0.4
TCF4-253ENST00000626466 AAK1Q2M2I8 961 aa12.53□□□□□ -0.4
TCF4-253ENST00000626466 SYDE2Q5VT97 1194 aa12.53□□□□□ -0.4
TCF4-253ENST00000626466 NACAP1Q9BZK3 213 aa12.53□□□□□ -0.4
TCF4-253ENST00000626466 FTOQ9C0B1 505 aaKnown RBP eCLIP12.53□□□□□ -0.4
TCF4-253ENST00000626466 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 ACTN1P12814 892 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 EDNRBP24530 442 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 CPT1AP50416 773 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 CHMP4BP1P59074 171 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 WDR5P61964 334 aaKnown RBP12.52□□□□□ -0.41
TCF4-253ENST00000626466 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 TMEM31Q5JXX7 168 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 BTNL9Q6UXG8 535 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 HLA-CQ95604 372 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 GPATCH3Q96I76 525 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 FSD1Q9BTV5 496 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 DCTPP1Q9H773 170 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 COG5Q9UP83 839 aa12.52□□□□□ -0.41
TCF4-253ENST00000626466 A6NJR5 290 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 RANBP6O60518 1105 aaKnown RBP12.51□□□□□ -0.41
TCF4-253ENST00000626466 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
TCF4-253ENST00000626466 RFC2P35250 354 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
TCF4-253ENST00000626466 NFRKBQ6P4R8 1299 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 TET1Q8NFU7 2136 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 PHOSPHO2Q8TCD6 241 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 DCAF4Q8WV16 495 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 WNT8BQ93098 351 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 GPHNQ9NQX3 736 aaPredicted RBP12.51□□□□□ -0.41
TCF4-253ENST00000626466 ADD3Q9UEY8 706 aaKnown RBP12.51□□□□□ -0.41
TCF4-253ENST00000626466 MTUS1Q9ULD2 1270 aa12.51□□□□□ -0.41
TCF4-253ENST00000626466 XIRP2A4UGR9 3374 aa12.5□□□□□ -0.41
TCF4-253ENST00000626466 NBNO60934 754 aa12.5□□□□□ -0.41
TCF4-253ENST00000626466 RPS6P62753 249 aaKnown RBP12.5□□□□□ -0.41
TCF4-253ENST00000626466 PDE4DQ08499 809 aa12.5□□□□□ -0.41
TCF4-253ENST00000626466 RETREG2Q8NC44 543 aa12.5□□□□□ -0.41
TCF4-253ENST00000626466 AFG1LQ8WV93 481 aa12.5□□□□□ -0.41
TCF4-253ENST00000626466 KAT2BQ92831 832 aa12.5□□□□□ -0.41
TCF4-253ENST00000626466 CPVLQ9H3G5 476 aa12.5□□□□□ -0.41
TCF4-253ENST00000626466 RCAN3Q9UKA8 241 aa12.5□□□□□ -0.41
TCF4-253ENST00000626466 ORC4O43929 436 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 TXNP10599 105 aaKnown RBP12.49□□□□□ -0.41
TCF4-253ENST00000626466 PDHBP11177 359 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 PTGISQ16647 500 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 CCDC62Q6P9F0 684 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 TRAF7Q6Q0C0 670 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 RNF207Q6ZRF8 634 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 SCFD2Q8WU76 684 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 TBC1D5Q92609 795 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 SUGCTQ9HAC7 445 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 COL20A1Q9P218 1284 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 ANAPC4Q9UJX5 808 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 HCN4Q9Y3Q4 1203 aa12.49□□□□□ -0.41
TCF4-253ENST00000626466 LINC01553A4QN01 128 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 BAIAP3O94812 1187 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 MMP3P08254 477 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 FGRP09769 529 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 KCNJ6P48051 423 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 ARHGAP1Q07960 439 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 BFSP2Q13515 415 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 HIC1Q14526 733 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 GSE1Q14687 1217 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 LY6KQ17RY6 165 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 RRP12Q5JTH9 1297 aaKnown RBP12.48□□□□□ -0.41
TCF4-253ENST00000626466 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 LRRC8DQ7L1W4 858 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 UBE2ZQ9H832 354 aaPredicted RBP12.48□□□□□ -0.41
TCF4-253ENST00000626466 NOD1Q9Y239 953 aa12.48□□□□□ -0.41
TCF4-253ENST00000626466 TTC41PQ6P2S7 1318 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 RAD50Q92878 1312 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 SALL3Q9BXA9 1300 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 LOC102724159A0A0B4J2E5 919 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 KIF28PB7ZC32 967 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 PI4K2BG5E9Z4 385 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
TCF4-253ENST00000626466 GPR37L1O60883 481 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 TOP1P11387 765 aaKnown RBP12.47□□□□□ -0.41
TCF4-253ENST00000626466 SELPP16109 830 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 ZNF200P98182 395 aaPredicted RBP12.47□□□□□ -0.41
TCF4-253ENST00000626466 PTPN11Q06124 597 aaPredicted RBP12.47□□□□□ -0.41
TCF4-253ENST00000626466 ZNF543Q08ER8 600 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 MBTPS1Q14703 1052 aa12.47□□□□□ -0.41
TCF4-253ENST00000626466 PWP2Q15269 919 aaKnown RBP12.47□□□□□ -0.41
TCF4-253ENST00000626466 TRIM71Q2Q1W2 868 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms