RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 PKD2L1Q9P0L9 805 aa8.4□□□□□ -1.06
NPLOC4-221ENST00000625705 FBXO40Q9UH90 709 aa8.4□□□□□ -1.06
NPLOC4-221ENST00000625705 PNMA2Q9UL42 364 aa8.4□□□□□ -1.06
NPLOC4-221ENST00000625705 ZNF214Q9UL59 606 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-221ENST00000625705 SNX14Q9Y5W7 946 aa8.4□□□□□ -1.06
NPLOC4-221ENST00000625705 WDR19Q8NEZ3 1342 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 HMGCRP04035 888 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 ICAM1P05362 532 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 SNHG28P0DPA3 235 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 GNAQP50148 359 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 IRF5Q13568 498 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 GRM4Q14833 912 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 CDC37Q16543 378 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 TKFCQ3LXA3 575 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 ADCK5Q3MIX3 580 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 MSS51Q4VC12 460 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 MFSD14CQ5VZR4 134 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 NSMFQ6X4W1 530 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 RAB11FIP4Q86YS3 637 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 CHST13Q8NET6 341 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 IGDCC4Q8TDY8 1250 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 PIBF1Q8WXW3 757 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 AGBL1Q96MI9 1066 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 TRERF1Q96PN7 1200 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 CPVLQ9H3G5 476 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 ACAD9Q9H845 621 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 LY9Q9HBG7 655 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 SEC63Q9UGP8 760 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 ADAMTS5Q9UNA0 930 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 CYP46A1Q9Y6A2 500 aa8.39□□□□□ -1.07
NPLOC4-221ENST00000625705 CEP350Q5VT06 3117 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 ZNF236Q9UL36 1845 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 KLF18A0A0U1RQI7 1052 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 PTPDC1A2A3K4 754 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 GOLGA8AA7E2F4 631 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 GOLGA8BA8MQT2 603 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 ATP2A1O14983 1001 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 ZBTB43O43298 467 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 CD2BP2O95400 341 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 INHAP05111 366 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 CPA1P15085 419 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 RXRAP19793 462 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 RPS6KB1P23443 525 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 CNGA1P29973 690 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 LIFRP42702 1097 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 SOX10P56693 466 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 TRAF1Q13077 416 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 GRB14Q14449 540 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 BTNL9Q6UXG8 535 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 FBXO11Q86XK2 927 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 ADGRF4Q8IZF3 695 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 ABRAQ8N0Z2 381 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 REPS2Q8NFH8 660 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 HLA-CQ95604 372 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 RRP36Q96EU6 259 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 USP26Q9BXU7 913 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 RANBP17Q9H2T7 1088 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 SENP2Q9HC62 589 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 MYH6P13533 1939 aa8.38□□□□□ -1.07
NPLOC4-221ENST00000625705 PFASO15067 1338 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 PGK2P07205 417 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 XRCC5P13010 732 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 CCL14Q16627 93 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 RTN1Q16799 776 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 Q6ZUG5 572 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 RUFY3Q7L099 469 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 STAG2Q8N3U4 1231 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 TRIB2Q92519 343 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 BRF1Q92994 677 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 ARMC5Q96C12 935 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 MPHOSPH6Q99547 160 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 LZTS2Q9BRK4 669 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 AMNQ9BXJ7 453 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 UPF3BQ9BZI7 483 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 RNF208Q9H0X6 261 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 HMX1Q9NP08 348 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 RBM28Q9NW13 759 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 GJD2Q9UKL4 321 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 RIPK3Q9Y572 518 aa8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 RBBP6Q7Z6E9 1792 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-221ENST00000625705 PLXNA1Q9UIW2 1896 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 ABCB11O95342 1321 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 CCDC196A0A1B0GTZ2 297 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 PALM3A6NDB9 673 aaPredicted RBP8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 CCL5P13501 91 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 TAL1P17542 331 aaPredicted RBP8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 CALML3P27482 149 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 CLCN1P35523 988 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 METAP2P50579 478 aaKnown RBP eCLIP8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 ANAPC15P60006 121 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 AKAP17AQ02040 695 aaKnown RBP8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 TROAPQ12815 778 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 QRICH1Q2TAL8 776 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 MUM1L1Q5H9M0 696 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 SGMS1Q86VZ5 419 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 CCDC82Q8N4S0 544 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 NPLOC4Q8TAT6 608 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms