RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 TEKT4Q8WW24 435 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 SH3GLB1Q9Y371 365 aa10.14□□□□□ -0.79
USB1-216ENST00000624720 MAP2K7O14733 419 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 MYCP01106 439 aaPredicted RBP10.13□□□□□ -0.79
USB1-216ENST00000624720 CD53P19397 219 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 TCIRG1Q13488 830 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 CCDC93Q567U6 631 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 OSTM1Q86WC4 334 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 FAM200AQ8TCP9 573 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 C1orf74Q96LT6 269 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 FAM227BQ96M60 508 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 GREM2Q9H772 168 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 VCPKMTQ9H867 229 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 A6NHS1 94 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 TTC34A8MYJ7 566 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 HOXA2O43364 376 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 CCDC166P0CW27 439 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 BNIP1Q12981 228 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 SLC51AQ86UW1 340 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 AMIGO3Q86WK7 504 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 RAB11FIP4Q86YS3 637 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 GRAMD2AQ8IUY3 354 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 PI4K2BQ8TCG2 481 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 ACMSDQ8TDX5 336 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 FSD1Q9BTV5 496 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 NIP7Q9Y221 180 aaKnown RBP eCLIP10.13□□□□□ -0.79
USB1-216ENST00000624720 PALLDQ8WX93 1383 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 C5P01031 1676 aa10.13□□□□□ -0.79
USB1-216ENST00000624720 FOXO4P98177 505 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 FKBP4Q02790 459 aaKnown RBP eCLIP10.12□□□□□ -0.79
USB1-216ENST00000624720 USH1GQ495M9 461 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 CCDC129Q6ZRS4 1044 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 CAPN12Q6ZSI9 719 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 GDAP1Q8TB36 358 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 TCEANC2Q96MN5 208 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 SEC62Q99442 399 aaKnown RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 QTRT2Q9H974 415 aaKnown RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 WDR35Q9P2L0 1181 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 DBNLQ9UJU6 430 aaKnown RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 MYPNQ86TC9 1320 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 KDM3BQ7LBC6 1761 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 POTEFA5A3E0 1075 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 WTIPA6NIX2 430 aaPredicted RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 GNPATO15228 680 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 TAF5LO75529 589 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 CNGA1P29973 690 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 BLMHQ13867 455 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 PLCB4Q15147 1175 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 LRRFIP1Q32MZ4 808 aaKnown RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 SPECC1Q5M775 1068 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 DAAM2Q86T65 1068 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 SEPT12Q8IYM1 358 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 FAM71BQ8TC56 605 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 GIPC2Q8TF65 315 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 RABGGTAQ92696 567 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 ZNF653Q96CK0 615 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 TTC14Q96N46 770 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 SEC31BQ9NQW1 1179 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 BCL9O00512 1426 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 RPAP1Q9BWH6 1393 aaPredicted RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 GOLGA6L7A0A1B0GV03 622 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 IRS4O14654 1257 aaPredicted RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 AP5Z1O43299 807 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 LDHBP07195 334 aaKnown RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 PLOD1Q02809 727 aaPredicted RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 LONRF2Q1L5Z9 754 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 FAM228AQ86W67 206 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 ARHGAP18Q8N392 663 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 CCDC155Q8N6L0 562 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 LINC00116Q8NCU8 138 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 CHAMP1Q96JM3 812 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 EIF2AQ9BY44 585 aaKnown RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 ZHX3Q9H4I2 956 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 ECHDC1Q9NTX5 307 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 CCDC87Q9NVE4 849 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 ZFATQ9P243 1243 aa10.12□□□□□ -0.79
USB1-216ENST00000624720 XPO7Q9UIA9 1087 aaKnown RBP10.12□□□□□ -0.79
USB1-216ENST00000624720 EFCAB8A8MWE9 144 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 CLTAP09496 248 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 ADORA1P30542 326 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 USP5P45974 858 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 CRY1Q16526 586 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 GKAP1Q5VSY0 366 aaPredicted RBP10.11□□□□□ -0.79
USB1-216ENST00000624720 SLC2A7Q6PXP3 512 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 C3orf67Q6ZVT6 689 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 CABP7Q86V35 215 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 NLRP10Q86W26 655 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 APLFQ8IW19 511 aaPredicted RBP10.11□□□□□ -0.79
USB1-216ENST00000624720 SYT2Q8N9I0 419 aaPredicted RBP10.11□□□□□ -0.79
USB1-216ENST00000624720 DDX27Q96GQ7 796 aaKnown RBP10.11□□□□□ -0.79
USB1-216ENST00000624720 VPS33BQ9H267 617 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 SLC40A1Q9NP59 571 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 CNNM1Q9NRU3 951 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 ATAD3AQ9NVI7 634 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 STK39Q9UEW8 545 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 SQORQ9Y6N5 450 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 MAP3K15Q6ZN16 1313 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 UBN2Q6ZU65 1347 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms