RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 KCTD1Q719H9 257 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 RETREG2Q8NC44 543 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 KIAA0895Q8NCT3 520 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 SNX29Q8TEQ0 813 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 RAD54LQ92698 747 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 GOLGA1Q92805 767 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZDHHC15Q96MV8 337 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 CHP1Q99653 195 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 SLF1Q9BQI6 1058 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 LRRC27Q9C0I9 530 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 DDX25Q9UHL0 483 aaKnown RBP9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 POTEMA6NI47 508 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 NDUFA10O95299 355 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 GCFC2P16383 781 aaKnown RBP9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 ARHGAP25P42331 645 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 MTIF2P46199 727 aaKnown RBP9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 TBC1D8BQ0IIM8 1120 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 TEX35Q5T0J7 233 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 CENPPQ6IPU0 288 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 TMCO3Q6UWJ1 677 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 SLC35F6Q8N357 371 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 RABGGTAQ92696 567 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 MRIQ9BWK5 157 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 DHX36Q9H2U1 1008 aaKnown RBP9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 PSTPIP2Q9H939 334 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 SLC39A2Q9NP94 309 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 CDC23Q9UJX2 597 aa9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 COL11A2P13942 1736 aaPredicted RBP9.29□□□□□ -0.92
SND1-IT1-201ENST00000623342 MYH4Q9Y623 1939 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 MMP10P09238 476 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 TRIM21P19474 475 aaKnown RBP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 KIF4BQ2VIQ3 1234 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 TMEM119Q4V9L6 283 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 SRGAP1Q7Z6B7 1085 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZSCAN29Q8IWY8 852 aaPredicted RBP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZFPM1Q8IX07 1006 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 CEP112Q8N8E3 955 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 FLAD1Q8NFF5 587 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 HPS3Q969F9 1004 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 NAP1L4Q99733 375 aaKnown RBP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 NOC4LQ9BVI4 516 aaKnown RBP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 TTYH3Q9C0H2 523 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 GLT8D2Q9H1C3 349 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 SEMA6BQ9H3T3 888 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 DBNDD1Q9H9R9 158 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 MARCH6O60337 910 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 FKBP1AP62942 108 aaKnown RBP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 DMTNQ08495 405 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 MEA1Q16626 185 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 MIIPQ5JXC2 388 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 FKBP15Q5T1M5 1219 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 WDR59Q6PJI9 974 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 GUF1Q8N442 669 aaKnown RBP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 DCAF4Q8WV16 495 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 HAS1Q92839 578 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZNF622Q969S3 477 aaKnown RBP eCLIP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 MKL1Q969V6 931 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 EEF2KMTQ96G04 330 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 NAPGQ99747 312 aaPredicted RBP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 NUDT12Q9BQG2 462 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZMYND15Q9H091 742 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 DNAJC18Q9H819 358 aa9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 ZNHIT6Q9NWK9 470 aaKnown RBP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
SND1-IT1-201ENST00000623342 PLSCR1O15162 318 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 ZRANB2O95218 330 aaKnown RBP eCLIP9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 FGFR1OPO95684 399 aaKnown RBP9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 ABL1P00519 1130 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 EEF2P13639 858 aaKnown RBP9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 CHMP4BP1P59074 171 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 ZBED6P86452 979 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 HDLBPQ00341 1268 aaKnown RBP9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 PSMD2Q13200 908 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 CERKLQ49MI3 558 aaPredicted RBP9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 FIGNQ5HY92 759 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 STRIP1Q5VSL9 837 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 KIAA0825Q8IV33 1275 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 IQCDQ96DY2 449 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 PCMTD1Q96MG8 357 aaPredicted RBP9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 ERGIC2Q96RQ1 377 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 IDI2Q9BXS1 227 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 KANSL2Q9H9L4 492 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 KCNQ5Q9NR82 932 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 NYAP2Q9P242 653 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 PI4KBQ9UBF8 816 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 PCDHA12Q9UN75 941 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 REXO2Q9Y3B8 237 aaKnown RBP9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 FHOD1Q9Y613 1164 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 A0A1W2PQJ5 194 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 RASSF10A6NK89 507 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 SLURP2P0DP57 97 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 SLC1A4P43007 532 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 TUBB4BP68371 445 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 KRT83P78385 493 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 LRRC63Q05C16 580 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 GABPB1Q06547 395 aaPredicted RBP9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 TCP10Q12799 353 aa9.27□□□□□ -0.93
SND1-IT1-201ENST00000623342 SEPT2Q15019 361 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms