RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CLSTN1O94985 981 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 HEXIM1O94992 359 aaKnown RBP15.63■□□□□ 0.09
LDB3-209ENST00000623056 UBA7P41226 1012 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 BCAMP50895 628 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 GUCY2FP51841 1108 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 IFT88Q13099 833 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 SEMA3FQ13275 785 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 PLCB4Q15147 1175 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 PFKFB3Q16875 520 aaPredicted RBP15.63■□□□□ 0.09
LDB3-209ENST00000623056 CFAP221Q4G0U5 840 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 CCDC40Q4G0X9 1142 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 KLHDC7AQ5VTJ3 777 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 GPIHBP1Q8IV16 184 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 DNAJC10Q8IXB1 793 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 CCDC155Q8N6L0 562 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 IQCDQ96DY2 449 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 ATP6V1G3Q96LB4 118 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 SUFUQ9UMX1 484 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 FAM205AQ6ZU69 1335 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 PJA2O43164 708 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 MAGEA1P43355 309 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 MTMR8Q96EF0 704 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 TACO1Q9BSH4 297 aaKnown RBP15.63■□□□□ 0.09
LDB3-209ENST00000623056 FAM207AQ9NSI2 230 aaPredicted RBP15.63■□□□□ 0.09
LDB3-209ENST00000623056 GGA2Q9UJY4 613 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 SIK3Q9Y2K2 1263 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 LRP5O75197 1615 aa15.63■□□□□ 0.09
LDB3-209ENST00000623056 RASSF9O75901 435 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 FAM107AO95990 144 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 RDXP35241 583 aaKnown RBP15.62■□□□□ 0.09
LDB3-209ENST00000623056 STK4Q13043 487 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 ITGB3BPQ13352 177 aaPredicted RBP15.62■□□□□ 0.09
LDB3-209ENST00000623056 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
LDB3-209ENST00000623056 GIMAP7Q8NHV1 300 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 TMEM60Q9H2L4 133 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 COL22A1Q8NFW1 1626 aaPredicted RBP15.62■□□□□ 0.09
LDB3-209ENST00000623056 SHANK3Q9BYB0 1731 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 MAGEB6P1A0A0J9YX57 407 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 HMGB1P1B2RPK0 211 aaPredicted RBP15.62■□□□□ 0.09
LDB3-209ENST00000623056 E7EVH7 732 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 KIF1CO43896 1103 aaKnown RBP15.62■□□□□ 0.09
LDB3-209ENST00000623056 PDE4DQ08499 809 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 PREPLQ4J6C6 727 aaPredicted RBP15.62■□□□□ 0.09
LDB3-209ENST00000623056 CCDC178Q5BJE1 867 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 C6orf89Q6UWU4 347 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 BLIDQ8IZY5 108 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 C1orf131Q8NDD1 294 aaKnown RBP15.62■□□□□ 0.09
LDB3-209ENST00000623056 RASGRP4Q8TDF6 673 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 CASKIN2Q8WXE0 1202 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 NOX5Q96PH1 765 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 MCM8Q9UJA3 840 aa15.62■□□□□ 0.09
LDB3-209ENST00000623056 LRRC53A6NM62 1247 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 BUB1O43683 1085 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 C21orf2O43822 256 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 NEDD9Q14511 834 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 CCSER1Q9C0I3 900 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 SLC40A1Q9NP59 571 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 TSKSQ9UJT2 592 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 DLEC1Q9Y238 1755 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 SRRM3A6NNA2 597 aaPredicted RBP15.61■□□□□ 0.09
LDB3-209ENST00000623056 FCER1AP12319 257 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 CALML3P27482 149 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 RASSF7Q02833 373 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 GFPT1Q06210 699 aaPredicted RBP15.61■□□□□ 0.09
LDB3-209ENST00000623056 VWA3BQ502W6 1294 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 RRAGAQ7L523 313 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 RNF14Q9UBS8 474 aa15.61■□□□□ 0.09
LDB3-209ENST00000623056 NMT2O60551 498 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 SLC1A4P43007 532 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 DRP2Q13474 957 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 WHAMMQ8TF30 809 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 CCDC47Q96A33 483 aaKnown RBP15.6■□□□□ 0.09
LDB3-209ENST00000623056 CYFIP2Q96F07 1278 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 CENPHQ9H3R5 247 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 MMRN2Q9H8L6 949 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 ADAMTS2O95450 1211 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 TRADDQ15628 312 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 CEP85LQ5SZL2 805 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 PPP4R3AQ6IN85 833 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 MAATS1Q7Z4T9 603 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 RNF10Q8N5U6 811 aaKnown RBP15.6■□□□□ 0.09
LDB3-209ENST00000623056 KRT12Q99456 494 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 TRIM9Q9C026 710 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 NDST4Q9H3R1 872 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 PPANQ9NQ55 473 aaKnown RBP15.6■□□□□ 0.09
LDB3-209ENST00000623056 PLAAQ9Y263 795 aa15.6■□□□□ 0.09
LDB3-209ENST00000623056 BAZ2AQ9UIF9 1905 aaKnown RBP15.59■□□□□ 0.09
LDB3-209ENST00000623056 PLCG1P19174 1290 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 HPDP32754 393 aaPredicted RBP15.59■□□□□ 0.09
LDB3-209ENST00000623056 DNA2P51530 1060 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 ASIC1P78348 528 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 ASTE1Q2TB18 679 aaPredicted RBP15.59■□□□□ 0.09
LDB3-209ENST00000623056 TMC4Q7Z404 712 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 GPKOWQ92917 476 aaPredicted RBP eCLIP15.59■□□□□ 0.09
LDB3-209ENST00000623056 RIOK1Q9BRS2 568 aaKnown RBP15.59■□□□□ 0.09
LDB3-209ENST00000623056 SEMA6BQ9H3T3 888 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 TMBIM4Q9HC24 238 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 PCDHA4Q9UN74 947 aa15.59■□□□□ 0.09
LDB3-209ENST00000623056 AHDC1Q5TGY3 1603 aaPredicted RBP15.59■□□□□ 0.09
LDB3-209ENST00000623056 ZPR1O75312 459 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms