RNA–Protein interactions for RNA: ENST00000622698.4

PCDH11Y-207, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-207ENST00000622698 PHACTR2O75167 634 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 POLGP54098 1239 aaPredicted RBP12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 SP3Q02447 781 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 POSTNQ15063 836 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 INF2Q27J81 1249 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 NSUN7Q8NE18 718 aaKnown RBP12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 COL4A3BPQ9Y5P4 624 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 VCAM1P19320 739 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 MCM4P33991 863 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 LAMC2Q13753 1193 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 GSE1Q14687 1217 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 XKR9Q5GH70 373 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 CYB5R4Q7L1T6 521 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 TIPINQ9BVW5 301 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 KCNJ14Q9UNX9 436 aa12.2□□□□□ -0.46
PCDH11Y-207ENST00000622698 EIF2AK2P19525 551 aaKnown RBP12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 UTP14CQ5TAP6 766 aaKnown RBP12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 PRAMEF18Q5VWM3 479 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 MSANTD4Q8NCY6 345 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 NMRK2Q9NPI5 230 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 PPME1Q9Y570 386 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 SPRYD7Q5W111 196 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 CAVIN1Q6NZI2 390 aaKnown RBP12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 GPRASP2Q96D09 838 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 FRMD4BQ9Y2L6 1034 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 SNX16P57768 344 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 SEMA3FQ13275 785 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 MSL3Q8N5Y2 521 aaKnown RBP12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 MCPH1Q8NEM0 835 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 ZSWIM4Q9H7M6 989 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 SCN7AQ01118 1682 aa12.19□□□□□ -0.46
PCDH11Y-207ENST00000622698 TBCKQ8TEA7 893 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 ATRNL1Q5VV63 1379 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 CCDC169A6NNP5 214 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 MYL3P08590 195 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 YBX3P16989 372 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 YARSP54577 528 aaKnown RBP12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 TPH2Q8IWU9 490 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 MKRN1Q9UHC7 482 aaKnown RBP12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 CARNS1A5YM72 827 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 DDX39AO00148 427 aaKnown RBP12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 CABYRO75952 493 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 TATDN1Q6P1N9 297 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 SPATC1LQ9H0A9 340 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 VTA1Q9NP79 307 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 EIF3JO75822 258 aaKnown RBP12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 ERLIN2O94905 339 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 ZSCAN20P17040 1043 aaPredicted RBP12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 YWHAEP62258 255 aaKnown RBP12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 TBC1D8BQ0IIM8 1120 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 CCDC70Q6NSX1 233 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 MOXD1Q6UVY6 613 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 FBXL16Q8N461 479 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 PDILTQ8N807 584 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 DHX58Q96C10 678 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 ATG4CQ96DT6 458 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 LBHD1Q9BQE6 289 aaPredicted RBP12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 SPEF2Q9C093 1822 aa12.18□□□□□ -0.46
PCDH11Y-207ENST00000622698 PPP6R2O75170 966 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 MTIF2P46199 727 aaKnown RBP12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 FAM160A1Q05DH4 1040 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 DMP1Q13316 513 aaPredicted RBP12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 CUL4AQ13619 759 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 C7orf31Q8N865 590 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 LRFN2Q9ULH4 789 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 RRN3P2A6NIE6 340 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 P4HA1P13674 534 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 ATF7P17544 494 aaPredicted RBP12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 KYAT1Q16773 422 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 PDXDC2PQ6P474 469 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 SMAP1Q8IYB5 467 aaPredicted RBP12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 OR6J1Q8NGC5 347 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 IGDCC4Q8TDY8 1250 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 KCNB2Q92953 911 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 COL2A1P02458 1487 aaPredicted RBP12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 MAGEB2O15479 319 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 ARHGAP4P98171 946 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 AMIGO3Q86WK7 504 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 RIOX2Q8IUF8 465 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 FNBP1Q96RU3 617 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 ASCC2Q9H1I8 757 aaPredicted RBP12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 PAPPAQ13219 1627 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 TJP1Q07157 1748 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 MARCKSP29966 332 aaPredicted RBP12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 CETN2P41208 172 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 FAM110CQ1W6H9 321 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 CATSPERGQ6ZRH7 1159 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 ANKRD13CQ8N6S4 541 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 GMLQ99445 158 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 SMARCAD1Q9H4L7 1026 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 KCNQ5Q9NR82 932 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 ROBO3Q96MS0 1386 aa12.17□□□□□ -0.46
PCDH11Y-207ENST00000622698 SUPT20HL2P0C7V6 817 aa12.16□□□□□ -0.46
PCDH11Y-207ENST00000622698 CTCFP49711 727 aaPredicted RBP12.16□□□□□ -0.46
PCDH11Y-207ENST00000622698 SURF1Q15526 300 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms