RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 IKBKGQ9Y6K9 419 aa11.46□□□□□ -0.58
COL25A1-209ENST00000622134 ACTN4O43707 911 aaKnown RBP11.45□□□□□ -0.58
COL25A1-209ENST00000622134 SCG2P13521 617 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 HERC4Q5GLZ8 1057 aaPredicted RBP11.45□□□□□ -0.58
COL25A1-209ENST00000622134 SDR42E1Q8WUS8 393 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 RNF34Q969K3 372 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 IQCDQ96DY2 449 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 KCNH3Q9ULD8 1083 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 CPDO75976 1380 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 ATP1A2P50993 1020 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 MRPS9P82933 396 aaKnown RBP11.45□□□□□ -0.58
COL25A1-209ENST00000622134 RASIP1Q5U651 963 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 TNNC2P02585 160 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 XKR9Q5GH70 373 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 ZMYM1Q5SVZ6 1142 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 SYDE2Q5VT97 1194 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 CCDC110Q8TBZ0 833 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 DCAF4Q8WV16 495 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 WRNIP1Q96S55 665 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 BATF3Q9NR55 127 aa11.45□□□□□ -0.58
COL25A1-209ENST00000622134 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL25A1-209ENST00000622134 IKBKBO14920 756 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 N4BP1O75113 896 aaKnown RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 SASH1O94885 1247 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 POSTNQ15063 836 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 TRIM68Q6AZZ1 485 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 TRIM58Q8NG06 486 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 SLC7A3Q8WY07 619 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 CSRNP2Q9H175 543 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 LAD1O00515 517 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 TRIM66O15016 1216 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 GNA14O95837 355 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 CPA1P15085 419 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 ADD2P35612 726 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 KRT40Q6A162 431 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 EP400NLQ6ZTU2 488 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 RGS22Q8NE09 1264 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 GDAP1L1Q96MZ0 367 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 ZNF277Q9NRM2 450 aaPredicted RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 GINM1Q9NU53 330 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 TPX2Q9ULW0 747 aaKnown RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 PCDHA12Q9UN75 941 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 MINPP1Q9UNW1 487 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 CDC42BPBQ9Y5S2 1711 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 KCNQ2O43526 872 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 EXOC3O60645 756 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 HSPD1P10809 573 aaKnown RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 LMNB1P20700 586 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 POLGP54098 1239 aaPredicted RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 ADKP55263 362 aaKnown RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 CABP7Q86V35 215 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 RIOK1Q9BRS2 568 aaKnown RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 ISCA1Q9BUE6 129 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 PUS3Q9BZE2 481 aaKnown RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 INO80BQ9C086 356 aaPredicted RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 UTP11Q9Y3A2 253 aaKnown RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 ATP6V0A2Q9Y487 856 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 SYNRGQ9UMZ2 1314 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 EEF2P13639 858 aaKnown RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 EPHB4P54760 987 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 ZBTB17Q13105 803 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 AOC3Q16853 763 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 KRT71Q3SY84 523 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 ALS2CLQ60I27 953 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 MARCH10Q8NA82 808 aaPredicted RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 CCDC197Q8NCU1 140 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 SLF1Q9BQI6 1058 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 NOP53Q9NZM5 478 aaKnown RBP11.44□□□□□ -0.58
COL25A1-209ENST00000622134 USH1CQ9Y6N9 552 aa11.44□□□□□ -0.58
COL25A1-209ENST00000622134 TCP1P17987 556 aaKnown RBP11.43□□□□□ -0.58
COL25A1-209ENST00000622134 ELF1P32519 619 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 FYB2Q5VWT5 728 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 TPH2Q8IWU9 490 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 MCUR1Q96AQ8 359 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 FAM167AQ96KS9 214 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 MAGEF1Q9HAY2 307 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 CEP152O94986 1710 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 NRXN1Q9ULB1 1477 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 ADAMTS13Q76LX8 1427 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 USP17L10C9JJH3 530 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 TRAPPC10P48553 1259 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 CALCOCO2Q13137 446 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 DYNC1I2Q13409 638 aaKnown RBP11.43□□□□□ -0.58
COL25A1-209ENST00000622134 CHAMP1Q96JM3 812 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 ZFYVE28Q9HCC9 887 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 FAM114A2Q9NRY5 505 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 DONSONQ9NYP3 566 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 ABCC12Q96J65 1359 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 SMIM23A6NLE4 172 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 TLR3O15455 904 aaKnown RBP11.43□□□□□ -0.58
COL25A1-209ENST00000622134 LIG4P49917 911 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 POLA2Q14181 598 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 DCAF17Q5H9S7 520 aaPredicted RBP11.43□□□□□ -0.58
COL25A1-209ENST00000622134 RNF169Q8NCN4 708 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 PPP2R3CQ969Q6 453 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 ABCB6Q9NP58 842 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 FEM1BQ9UK73 627 aa11.43□□□□□ -0.58
COL25A1-209ENST00000622134 PPP1R12AO14974 1030 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms