RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
SYNRG-229ENST00000621136 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
SYNRG-229ENST00000621136 CUL5Q93034 780 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 IQCGQ9H095 443 aaKnown RBP13.69□□□□□ -0.22
SYNRG-229ENST00000621136 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 CHCHD3Q9NX63 227 aaKnown RBP13.69□□□□□ -0.22
SYNRG-229ENST00000621136 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
SYNRG-229ENST00000621136 PPP1R9AQ9ULJ8 1098 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 ARHGAP42A6NI28 874 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 DNAJC6O75061 913 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 CIB2O75838 187 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 EZH2Q15910 746 aaKnown RBP13.69□□□□□ -0.22
SYNRG-229ENST00000621136 SWT1Q5T5J6 900 aaKnown RBP13.69□□□□□ -0.22
SYNRG-229ENST00000621136 NKX2-3Q8TAU0 364 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 DTX3LQ8TDB6 740 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 HAUS1Q96CS2 278 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 CALML4Q96GE6 196 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 MED15Q96RN5 788 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 ASIC3Q9UHC3 531 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 TNRQ92752 1358 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 ATP2A2P16615 1042 aaKnown RBP13.69□□□□□ -0.22
SYNRG-229ENST00000621136 SLC8A3P57103 927 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 AMOTQ4VCS5 1084 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 RETREG2Q8NC44 543 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 MS4A14Q96JA4 679 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 NBPF3Q9H094 633 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 PUS7LQ9H0K6 701 aaKnown RBP13.69□□□□□ -0.22
SYNRG-229ENST00000621136 MYO1AQ9UBC5 1043 aa13.69□□□□□ -0.22
SYNRG-229ENST00000621136 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
SYNRG-229ENST00000621136 FXR1P51114 621 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYNRG-229ENST00000621136 KLHL30Q0D2K2 578 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 ANKRD20A3Q5VUR7 823 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 CCDC174Q6PII3 467 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 MB21D2Q8IYB1 491 aaPredicted RBP13.68□□□□□ -0.22
SYNRG-229ENST00000621136 MDM1Q8TC05 714 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 SEC16BQ96JE7 1060 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 PSMD1Q99460 953 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 CSRNP2Q9H175 543 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 SEC31BQ9NQW1 1179 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 HOMER3Q9NSC5 361 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 N4BP2Q86UW6 1770 aaPredicted RBP13.68□□□□□ -0.22
SYNRG-229ENST00000621136 HMGB1P1B2RPK0 211 aaPredicted RBP13.68□□□□□ -0.22
SYNRG-229ENST00000621136 PLCB3Q01970 1234 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 CCDC105Q8IYK2 499 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 HIPK4Q8NE63 616 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 RPGRQ92834 1020 aaKnown RBP13.68□□□□□ -0.22
SYNRG-229ENST00000621136 ECT2Q9H8V3 914 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 NHEJ1Q9H9Q4 299 aaPredicted RBP13.68□□□□□ -0.22
SYNRG-229ENST00000621136 PXDNQ92626 1479 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 PPP6R2O75170 966 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 ADORA1P30542 326 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 SERPINB4P48594 390 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 PAPOLAP51003 745 aaKnown RBP13.68□□□□□ -0.22
SYNRG-229ENST00000621136 HHATQ5VTY9 493 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 ABHD10Q9NUJ1 306 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 PTPN22Q9Y2R2 807 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 V9GY48 417 aaPredicted RBP13.68□□□□□ -0.22
SYNRG-229ENST00000621136 ANKARQ7Z5J8 1434 aa13.68□□□□□ -0.22
SYNRG-229ENST00000621136 PRDM1O75626 825 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 TRPA1O75762 1119 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 SKIP12755 728 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 ZNF18P17022 549 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 POLD1P28340 1107 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 SMTNP53814 917 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 NR5A1Q13285 461 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 KRT31Q15323 416 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 DZIP3Q86Y13 1208 aaKnown RBP13.67□□□□□ -0.22
SYNRG-229ENST00000621136 CCDC65Q8IXS2 484 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 ENOX1Q8TC92 643 aaKnown RBP13.67□□□□□ -0.22
SYNRG-229ENST00000621136 HNRNPLLQ8WVV9 542 aaKnown RBP13.67□□□□□ -0.22
SYNRG-229ENST00000621136 EPSTI1Q96J88 318 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 ATP6V1G3Q96LB4 118 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 BATF3Q9NR55 127 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 ANGEL1Q9UNK9 670 aaKnown RBP13.67□□□□□ -0.22
SYNRG-229ENST00000621136 CTNNA2P26232 953 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 PDCD7Q8N8D1 485 aaKnown RBP13.67□□□□□ -0.22
SYNRG-229ENST00000621136 TCEAL9Q9UHQ7 104 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 RAB21Q9UL25 225 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 TRPC6Q9Y210 931 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 IKBKGQ9Y6K9 419 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 PHLDB3Q6NSJ2 640 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 SLC17A8Q8NDX2 589 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 PIP4K2CQ8TBX8 421 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 MYCBPAPQ8TBZ2 947 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 AMPD3Q01432 767 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 USP4Q13107 963 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 RCN2Q14257 317 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 CCDC62Q6P9F0 684 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 ATG9AQ7Z3C6 839 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 MIGA1Q8NAN2 632 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 MSANTD4Q8NCY6 345 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 FBXO41Q8TF61 875 aa13.67□□□□□ -0.22
SYNRG-229ENST00000621136 KCNA6P17658 529 aa13.66□□□□□ -0.22
SYNRG-229ENST00000621136 TPP2P29144 1249 aaPredicted RBP13.66□□□□□ -0.22
SYNRG-229ENST00000621136 SCARF1Q14162 830 aa13.66□□□□□ -0.22
SYNRG-229ENST00000621136 NR1I3Q14994 352 aa13.66□□□□□ -0.22
SYNRG-229ENST00000621136 MAP3K14Q99558 947 aa13.66□□□□□ -0.22
SYNRG-229ENST00000621136 GPAA1O43292 621 aa13.66□□□□□ -0.22
SYNRG-229ENST00000621136 KRT2P35908 639 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms