RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 SCG2P13521 617 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 NAPAP54920 295 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 AKAP17AQ02040 695 aaKnown RBP21.05■□□□□ 0.96
LITAF-220ENST00000620789 SCRN1Q12765 414 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 CCDC144BQ3MJ40 725 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 TYW1BQ6NUM6 668 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 CPLX2Q6PUV4 134 aaKnown RBP21.05■□□□□ 0.96
LITAF-220ENST00000620789 NOL8Q76FK4 1167 aaKnown RBP21.05■□□□□ 0.96
LITAF-220ENST00000620789 EEPD1Q7L9B9 569 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 FBXO16Q8IX29 292 aaPredicted RBP21.05■□□□□ 0.96
LITAF-220ENST00000620789 CUL5Q93034 780 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 IWS1Q96ST2 819 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 SLC26A6Q9BXS9 759 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 PSTPIP2Q9H939 334 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 STXBP3O00186 592 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 MEIS2O14770 477 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 PPFIA3O75145 1194 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 FARP2O94887 1054 aaPredicted RBP21.04■□□□□ 0.96
LITAF-220ENST00000620789 EIF2AK2P19525 551 aaKnown RBP21.04■□□□□ 0.96
LITAF-220ENST00000620789 PKN1Q16512 942 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 TAPT1Q6NXT6 567 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 USP17L6PQ6QN14 398 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 UBE2Q1Q7Z7E8 422 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 FCHSD1Q86WN1 690 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 SMARCC2Q8TAQ2 1214 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 TBC1D32Q96NH3 1257 aa21.04■□□□□ 0.96
LITAF-220ENST00000620789 MKI67P46013 3256 aaKnown RBP21.04■□□□□ 0.96
LITAF-220ENST00000620789 ME3Q16798 604 aa21.03■□□□□ 0.96
LITAF-220ENST00000620789 TRIM22Q8IYM9 498 aa21.03■□□□□ 0.96
LITAF-220ENST00000620789 LENG1Q96BZ8 264 aaPredicted RBP21.03■□□□□ 0.96
LITAF-220ENST00000620789 PDCD2LQ9BRP1 358 aa21.03■□□□□ 0.96
LITAF-220ENST00000620789 XPNPEP3Q9NQH7 507 aa21.03■□□□□ 0.96
LITAF-220ENST00000620789 PDGFCQ9NRA1 345 aa21.03■□□□□ 0.96
LITAF-220ENST00000620789 ADCY6O43306 1168 aa21.02■□□□□ 0.96
LITAF-220ENST00000620789 DUSP11O75319 330 aaKnown RBP21.02■□□□□ 0.96
LITAF-220ENST00000620789 LARGE1O95461 756 aa21.02■□□□□ 0.96
LITAF-220ENST00000620789 NR3C2P08235 984 aa21.02■□□□□ 0.96
LITAF-220ENST00000620789 ADCYAP1R1P41586 468 aa21.02■□□□□ 0.96
LITAF-220ENST00000620789 MNX1P50219 401 aaPredicted RBP21.02■□□□□ 0.96
LITAF-220ENST00000620789 SSRP1Q08945 709 aaKnown RBP21.02■□□□□ 0.96
LITAF-220ENST00000620789 RABEP1Q15276 862 aa21.02■□□□□ 0.96
LITAF-220ENST00000620789 STXBP2Q15833 593 aa21.02■□□□□ 0.96
LITAF-220ENST00000620789 TEX2Q8IWB9 1127 aa21.02■□□□□ 0.96
LITAF-220ENST00000620789 FRMPD4Q14CM0 1322 aa21.02■□□□□ 0.95
LITAF-220ENST00000620789 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.01■□□□□ 0.95
LITAF-220ENST00000620789 CDKL5O76039 1030 aa21.01■□□□□ 0.95
LITAF-220ENST00000620789 TNFAIP2Q03169 654 aa21.01■□□□□ 0.95
LITAF-220ENST00000620789 PGM5Q15124 567 aa21.01■□□□□ 0.95
LITAF-220ENST00000620789 UBE2SQ16763 222 aa21.01■□□□□ 0.95
LITAF-220ENST00000620789 IQSEC1Q6DN90 963 aa21.01■□□□□ 0.95
LITAF-220ENST00000620789 ARRDC4Q8NCT1 418 aa21.01■□□□□ 0.95
LITAF-220ENST00000620789 DIS3LQ8TF46 1054 aaKnown RBP21.01■□□□□ 0.95
LITAF-220ENST00000620789 GTF3C6Q969F1 213 aa21.01■□□□□ 0.95
LITAF-220ENST00000620789 RIC8AQ9NPQ8 531 aa21.01■□□□□ 0.95
LITAF-220ENST00000620789 RBM47A0AV96 593 aaKnown RBP21■□□□□ 0.95
LITAF-220ENST00000620789 SMCO2A6NFE2 343 aa21■□□□□ 0.95
LITAF-220ENST00000620789 DEXIO95424 95 aa21■□□□□ 0.95
LITAF-220ENST00000620789 ADCY7P51828 1080 aa21■□□□□ 0.95
LITAF-220ENST00000620789 MLLT1Q03111 559 aaPredicted RBP21■□□□□ 0.95
LITAF-220ENST00000620789 NECAB1Q8N987 351 aa21■□□□□ 0.95
LITAF-220ENST00000620789 CCDC12Q8WUD4 166 aaPredicted RBP21■□□□□ 0.95
LITAF-220ENST00000620789 PAWRQ96IZ0 340 aaKnown RBP21■□□□□ 0.95
LITAF-220ENST00000620789 GLT8D2Q9H1C3 349 aa21■□□□□ 0.95
LITAF-220ENST00000620789 LIMCH1Q9UPQ0 1083 aa21■□□□□ 0.95
LITAF-220ENST00000620789 SYNRGQ9UMZ2 1314 aa21■□□□□ 0.95
LITAF-220ENST00000620789 ESYT2A0FGR8 921 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 DNM1LO00429 736 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 ADAMTS4O75173 837 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 EIF3JO75822 258 aaKnown RBP20.99■□□□□ 0.95
LITAF-220ENST00000620789 PGK1P00558 417 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 SMPD1P17405 629 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 LRRC41Q15345 812 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 GJC2Q5T442 439 aaPredicted RBP20.99■□□□□ 0.95
LITAF-220ENST00000620789 NECAB2Q7Z6G3 386 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 VSIG10LQ86VR7 867 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 IL27Q8NEV9 243 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 IL31RAQ8NI17 732 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 SCFD2Q8WU76 684 aa20.99■□□□□ 0.95
LITAF-220ENST00000620789 GNEQ9Y223 722 aaKnown RBP20.99■□□□□ 0.95
LITAF-220ENST00000620789 TNRC18O15417 2968 aaPredicted RBP20.98■□□□□ 0.95
LITAF-220ENST00000620789 SPDYE3A6NKU9 549 aa20.98■□□□□ 0.95
LITAF-220ENST00000620789 CTDNEP1O95476 244 aa20.98■□□□□ 0.95
LITAF-220ENST00000620789 MYCLP12524 364 aaPredicted RBP20.98■□□□□ 0.95
LITAF-220ENST00000620789 CCND2P30279 289 aa20.98■□□□□ 0.95
LITAF-220ENST00000620789 DUSP28Q4G0W2 176 aa20.98■□□□□ 0.95
LITAF-220ENST00000620789 RNF180Q86T96 592 aa20.98■□□□□ 0.95
LITAF-220ENST00000620789 WDR11Q9BZH6 1224 aa20.98■□□□□ 0.95
LITAF-220ENST00000620789 ZMYND12Q9H0C1 365 aa20.98■□□□□ 0.95
LITAF-220ENST00000620789 UPF3AQ9H1J1 476 aaKnown RBP20.98■□□□□ 0.95
LITAF-220ENST00000620789 SH3GLB2Q9NR46 395 aa20.98■□□□□ 0.95
LITAF-220ENST00000620789 STK36Q9NRP7 1315 aa20.98■□□□□ 0.95
LITAF-220ENST00000620789 KBTBD13C9JR72 458 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 ST18O60284 1047 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 MYCNP04198 464 aaPredicted RBP20.97■□□□□ 0.95
LITAF-220ENST00000620789 COL6A1P12109 1028 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 GJA9P57773 515 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 TMEM63BQ5T3F8 832 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 SEPT14Q6ZU15 432 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 TLK2Q86UE8 772 aa20.97■□□□□ 0.95
LITAF-220ENST00000620789 CCDC148Q8NFR7 591 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms