RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 CHD7Q9P2D1 2997 aa25.83■■□□□ 1.72
SRRT-218ENST00000620394 B4E1Z4 1266 aa25.82■■□□□ 1.72
SRRT-218ENST00000620394 ATP2A2P16615 1042 aaKnown RBP25.82■■□□□ 1.72
SRRT-218ENST00000620394 ALDH5A1P51649 535 aaPredicted RBP25.82■■□□□ 1.72
SRRT-218ENST00000620394 PSMC6P62333 389 aa25.82■■□□□ 1.72
SRRT-218ENST00000620394 PNMA1Q8ND90 353 aa25.82■■□□□ 1.72
SRRT-218ENST00000620394 PURBQ96QR8 312 aaKnown RBP25.82■■□□□ 1.72
SRRT-218ENST00000620394 ALDH8A1Q9H2A2 487 aaPredicted RBP25.82■■□□□ 1.72
SRRT-218ENST00000620394 CTNNA3Q9UI47 895 aa25.82■■□□□ 1.72
SRRT-218ENST00000620394 SLC30A10Q6XR72 485 aa25.81■■□□□ 1.72
SRRT-218ENST00000620394 C1QTNF1Q9BXJ1 281 aa25.81■■□□□ 1.72
SRRT-218ENST00000620394 PDGFCQ9NRA1 345 aa25.81■■□□□ 1.72
SRRT-218ENST00000620394 SCN5AQ14524 2016 aa25.8■■□□□ 1.72
SRRT-218ENST00000620394 SUPT20HL2P0C7V6 817 aa25.8■■□□□ 1.72
SRRT-218ENST00000620394 PTGS1P23219 599 aa25.8■■□□□ 1.72
SRRT-218ENST00000620394 EEPD1Q7L9B9 569 aa25.8■■□□□ 1.72
SRRT-218ENST00000620394 ENAHQ8N8S7 591 aaPredicted RBP25.8■■□□□ 1.72
SRRT-218ENST00000620394 SCLYQ96I15 445 aa25.8■■□□□ 1.72
SRRT-218ENST00000620394 ZSCAN10Q96SZ4 725 aaPredicted RBP25.8■■□□□ 1.72
SRRT-218ENST00000620394 MYOGP15173 224 aa25.79■■□□□ 1.72
SRRT-218ENST00000620394 KRT23Q9C075 422 aa25.79■■□□□ 1.72
SRRT-218ENST00000620394 CNNM2Q9H8M5 875 aa25.79■■□□□ 1.72
SRRT-218ENST00000620394 POLR3EQ9NVU0 708 aa25.79■■□□□ 1.72
SRRT-218ENST00000620394 ZSWIM5Q9P217 1185 aa25.79■■□□□ 1.72
SRRT-218ENST00000620394 TNKSO95271 1327 aa25.79■■□□□ 1.72
SRRT-218ENST00000620394 SCN10AQ9Y5Y9 1956 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 PTPDC1A2A3K4 754 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 GTPBP6O43824 516 aaPredicted RBP25.78■■□□□ 1.72
SRRT-218ENST00000620394 GOLGA8HP0CJ92 632 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 BMP1P13497 986 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 EDNRBP24530 442 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 DUSP28Q4G0W2 176 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 ASPRV1Q53RT3 343 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 TMEM67Q5HYA8 995 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 RNF207Q6ZRF8 634 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 VWCEQ96DN2 955 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 FAM122AQ96E09 287 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 NECAB3Q96P71 396 aaPredicted RBP25.78■■□□□ 1.72
SRRT-218ENST00000620394 MAF1Q9H063 256 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 KAT14Q9H8E8 782 aa25.78■■□□□ 1.72
SRRT-218ENST00000620394 RBM47A0AV96 593 aaKnown RBP25.77■■□□□ 1.72
SRRT-218ENST00000620394 RPS6P62753 249 aaKnown RBP25.77■■□□□ 1.72
SRRT-218ENST00000620394 TFF2Q03403 129 aa25.77■■□□□ 1.72
SRRT-218ENST00000620394 TTLL4Q14679 1199 aa25.77■■□□□ 1.72
SRRT-218ENST00000620394 SKIV2LQ15477 1246 aaKnown RBP25.77■■□□□ 1.72
SRRT-218ENST00000620394 KIAA1211Q6ZU35 1233 aa25.77■■□□□ 1.72
SRRT-218ENST00000620394 SLC9A7Q96T83 725 aa25.77■■□□□ 1.72
SRRT-218ENST00000620394 TRMT13Q9NUP7 481 aaKnown RBP25.77■■□□□ 1.72
SRRT-218ENST00000620394 CA3P07451 260 aa25.76■■□□□ 1.71
SRRT-218ENST00000620394 ACTN1P12814 892 aa25.76■■□□□ 1.71
SRRT-218ENST00000620394 POU3F3P20264 500 aaPredicted RBP25.76■■□□□ 1.71
SRRT-218ENST00000620394 CPT1AP50416 773 aa25.76■■□□□ 1.71
SRRT-218ENST00000620394 PURAQ00577 322 aaKnown RBP25.76■■□□□ 1.71
SRRT-218ENST00000620394 TMEM63BQ5T3F8 832 aa25.76■■□□□ 1.71
SRRT-218ENST00000620394 RGS22Q8NE09 1264 aa25.76■■□□□ 1.71
SRRT-218ENST00000620394 DNERQ8NFT8 737 aa25.76■■□□□ 1.71
SRRT-218ENST00000620394 CPVLQ9H3G5 476 aa25.76■■□□□ 1.71
SRRT-218ENST00000620394 COL4A4P53420 1690 aaPredicted RBP25.76■■□□□ 1.71
SRRT-218ENST00000620394 BDP1A6H8Y1 2624 aa25.76■■□□□ 1.71
SRRT-218ENST00000620394 PRRC2BQ5JSZ5 2229 aaKnown RBP25.75■■□□□ 1.71
SRRT-218ENST00000620394 CALML3P27482 149 aa25.75■■□□□ 1.71
SRRT-218ENST00000620394 RFC2P35250 354 aa25.75■■□□□ 1.71
SRRT-218ENST00000620394 CDC37Q16543 378 aaPredicted RBP25.75■■□□□ 1.71
SRRT-218ENST00000620394 UBA5Q9GZZ9 404 aa25.75■■□□□ 1.71
SRRT-218ENST00000620394 CYP2C9P11712 490 aa25.74■■□□□ 1.71
SRRT-218ENST00000620394 KCNQ1P51787 676 aa25.74■■□□□ 1.71
SRRT-218ENST00000620394 DEFB128Q7Z7B8 93 aa25.74■■□□□ 1.71
SRRT-218ENST00000620394 UBAC1Q9BSL1 405 aa25.74■■□□□ 1.71
SRRT-218ENST00000620394 MTCH2Q9Y6C9 303 aa25.74■■□□□ 1.71
SRRT-218ENST00000620394 ABCB11O95342 1321 aa25.73■■□□□ 1.71
SRRT-218ENST00000620394 SEC23AQ15436 765 aa25.73■■□□□ 1.71
SRRT-218ENST00000620394 USH1GQ495M9 461 aa25.73■■□□□ 1.71
SRRT-218ENST00000620394 ADGRF4Q8IZF3 695 aa25.73■■□□□ 1.71
SRRT-218ENST00000620394 PHOSPHO2Q8TCD6 241 aa25.73■■□□□ 1.71
SRRT-218ENST00000620394 MTG1Q9BT17 334 aaPredicted RBP25.73■■□□□ 1.71
SRRT-218ENST00000620394 WDR11Q9BZH6 1224 aa25.73■■□□□ 1.71
SRRT-218ENST00000620394 COG5Q9UP83 839 aa25.73■■□□□ 1.71
SRRT-218ENST00000620394 KIAA1217Q5T5P2 1943 aa25.73■■□□□ 1.71
SRRT-218ENST00000620394 PITPNM1O00562 1244 aa25.72■■□□□ 1.71
SRRT-218ENST00000620394 MYL3P08590 195 aa25.72■■□□□ 1.71
SRRT-218ENST00000620394 PARP1P09874 1014 aaKnown RBP25.72■■□□□ 1.71
SRRT-218ENST00000620394 CHMLP26374 656 aa25.72■■□□□ 1.71
SRRT-218ENST00000620394 RUFY2Q8WXA3 655 aa25.72■■□□□ 1.71
SRRT-218ENST00000620394 MPHOSPH6Q99547 160 aaKnown RBP25.72■■□□□ 1.71
SRRT-218ENST00000620394 GPHNQ9NQX3 736 aaPredicted RBP25.72■■□□□ 1.71
SRRT-218ENST00000620394 XIRP2A4UGR9 3374 aa25.72■■□□□ 1.71
SRRT-218ENST00000620394 REV3LO60673 3130 aa25.72■■□□□ 1.71
SRRT-218ENST00000620394 BRDTQ58F21 947 aaPredicted RBP25.71■■□□□ 1.71
SRRT-218ENST00000620394 NKRFO15226 690 aaKnown RBP eCLIP25.7■■□□□ 1.7
SRRT-218ENST00000620394 IRX6P78412 446 aaPredicted RBP25.7■■□□□ 1.7
SRRT-218ENST00000620394 PDE4DQ08499 809 aa25.7■■□□□ 1.7
SRRT-218ENST00000620394 QRICH1Q2TAL8 776 aa25.7■■□□□ 1.7
SRRT-218ENST00000620394 FAM47CQ5HY64 1035 aa25.7■■□□□ 1.7
SRRT-218ENST00000620394 IFIT1BQ5T764 474 aaKnown RBP25.7■■□□□ 1.7
SRRT-218ENST00000620394 NFRKBQ6P4R8 1299 aa25.7■■□□□ 1.7
SRRT-218ENST00000620394 CYB5R4Q7L1T6 521 aa25.7■■□□□ 1.7
SRRT-218ENST00000620394 OR6J1Q8NGC5 347 aa25.7■■□□□ 1.7
SRRT-218ENST00000620394 SCFD2Q8WU76 684 aa25.7■■□□□ 1.7
SRRT-218ENST00000620394 JMJD4Q9H9V9 463 aa25.7■■□□□ 1.7
SRRT-218ENST00000620394 PTPRSQ13332 1948 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms