RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 Q6ZUG5 572 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 CYB5R4Q7L1T6 521 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 ARMCX2Q7L311 632 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 PCSK9Q8NBP7 692 aaKnown RBP10.73□□□□□ -0.69
SYN3-213ENST00000619146 NEDD1Q8NHV4 660 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 IGDCC4Q8TDY8 1250 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 HERVK_113Q902F9 699 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 KIFC2Q96AC6 838 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 FGD4Q96M96 766 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 TCEANC2Q96MN5 208 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 IPO9Q96P70 1041 aaKnown RBP10.73□□□□□ -0.69
SYN3-213ENST00000619146 ZSCAN10Q96SZ4 725 aaPredicted RBP10.73□□□□□ -0.69
SYN3-213ENST00000619146 SLF1Q9BQI6 1058 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 TSPYL2Q9H2G4 693 aaPredicted RBP10.73□□□□□ -0.69
SYN3-213ENST00000619146 HIPK3Q9H422 1215 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 SPC25Q9HBM1 224 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 SH2B1Q9NRF2 756 aaPredicted RBP10.73□□□□□ -0.69
SYN3-213ENST00000619146 ISY1Q9ULR0 285 aaKnown RBP10.73□□□□□ -0.69
SYN3-213ENST00000619146 CTDP1Q9Y5B0 961 aaPredicted RBP10.73□□□□□ -0.69
SYN3-213ENST00000619146 KIAA1217Q5T5P2 1943 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 ELP1O95163 1332 aa10.73□□□□□ -0.69
SYN3-213ENST00000619146 SCN10AQ9Y5Y9 1956 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 SH2B2O14492 632 aaPredicted RBP10.72□□□□□ -0.69
SYN3-213ENST00000619146 CTAGE5O15320 804 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 EVCP57679 992 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 CNTN2Q02246 1040 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 WTAPQ15007 396 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 SYNE3Q6ZMZ3 975 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 EEPD1Q7L9B9 569 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 CHST3Q7LGC8 479 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 DEFB128Q7Z7B8 93 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 SGMS1Q86VZ5 419 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 DGKHQ86XP1 1220 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 CCDC144CPQ8IYA2 1237 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 ANKRD35Q8N283 1001 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 ANKS1AQ92625 1134 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 KHSRPQ92945 711 aaKnown RBP eCLIP10.72□□□□□ -0.69
SYN3-213ENST00000619146 LRFN3Q9BTN0 628 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 TEX13BQ9BXU2 312 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 WNT8AQ9H1J5 351 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 ASTN1O14525 1302 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 SYNGAP1Q96PV0 1343 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 PIEZO1Q92508 2521 aa10.72□□□□□ -0.69
SYN3-213ENST00000619146 DNAJC25-GNG10A0A024R161 153 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 EPOPA6NHQ4 379 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 TNKSO95271 1327 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 CD2BP2O95400 341 aaKnown RBP10.71□□□□□ -0.69
SYN3-213ENST00000619146 CD4P01730 458 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 HOXD11P31277 338 aaPredicted RBP10.71□□□□□ -0.69
SYN3-213ENST00000619146 RCAN1P53805 252 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 GJA9P57773 515 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 COL9A3Q14050 684 aaPredicted RBP10.71□□□□□ -0.69
SYN3-213ENST00000619146 TOB2Q14106 344 aaPredicted RBP10.71□□□□□ -0.69
SYN3-213ENST00000619146 TTLL4Q14679 1199 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 IFIT1BQ5T764 474 aaKnown RBP10.71□□□□□ -0.69
SYN3-213ENST00000619146 NFXL1Q6ZNB6 911 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 SPRED2Q7Z698 418 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 ENAHQ8N8S7 591 aaPredicted RBP10.71□□□□□ -0.69
SYN3-213ENST00000619146 BRF1Q92994 677 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 ZNF274Q96GC6 653 aaPredicted RBP10.71□□□□□ -0.69
SYN3-213ENST00000619146 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 PLIN4Q96Q06 1357 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.71□□□□□ -0.69
SYN3-213ENST00000619146 LRRC2Q9BYS8 371 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 UPF3AQ9H1J1 476 aaKnown RBP10.71□□□□□ -0.69
SYN3-213ENST00000619146 KANSL2Q9H9L4 492 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 LY9Q9HBG7 655 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 TPCN1Q9ULQ1 816 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 SLC12A7Q9Y666 1083 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 SLC4A7Q9Y6M7 1214 aa10.71□□□□□ -0.69
SYN3-213ENST00000619146 MICAL3Q7RTP6 2002 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 DOCK5Q9H7D0 1870 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 GRIN2DO15399 1336 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 CCDC69A6NI79 296 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 F5H6K3 240 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 DYNC1LI2O43237 492 aaPredicted RBP10.7□□□□□ -0.7
SYN3-213ENST00000619146 DHX16O60231 1041 aaKnown RBP10.7□□□□□ -0.7
SYN3-213ENST00000619146 B4GALT4O60513 344 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 ARHGEF15O94989 841 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 NDUFB10O96000 172 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 CA3P07451 260 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 HSP90AA1P07900 732 aaKnown RBP10.7□□□□□ -0.7
SYN3-213ENST00000619146 CST5P28325 142 aaPredicted RBP10.7□□□□□ -0.7
SYN3-213ENST00000619146 SNAP25P60880 206 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 TNFAIP2Q03169 654 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 KLRC3Q07444 240 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 ITGA7Q13683 1181 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 SEC23AQ15436 765 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 MAMDC4Q6UXC1 1216 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 CATIPQ7Z7H3 387 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 ARNTL2Q8WYA1 636 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 NOC4LQ9BVI4 516 aaKnown RBP10.7□□□□□ -0.7
SYN3-213ENST00000619146 C1QTNF1Q9BXJ1 281 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 MTIF3Q9H2K0 278 aaKnown RBP10.7□□□□□ -0.7
SYN3-213ENST00000619146 ABHD16BQ9H3Z7 469 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 PDGFCQ9NRA1 345 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 IL17RBQ9NRM6 502 aa10.7□□□□□ -0.7
SYN3-213ENST00000619146 KAT6AQ92794 2004 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 KLF18A0A0U1RQI7 1052 aa10.69□□□□□ -0.7
SYN3-213ENST00000619146 CCDC196A0A1B0GTZ2 297 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms