RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ACTN1P12814 892 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 CALML3P27482 149 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SSTR3P32745 418 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 RASSF7Q02833 373 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 STAG2Q8N3U4 1231 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MTRQ99707 1265 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 CCDC22O60826 627 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TNNC1P63316 161 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 RSPH3Q86UC2 560 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 CPNE8Q86YQ8 564 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TEKT1Q969V4 418 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 ZNF274Q96GC6 653 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 BAIAP2L1Q9UHR4 511 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MCF2LO15068 1137 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 BUB1O43683 1085 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TMED10P49755 219 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 HP1BP3Q5SSJ5 553 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 RINLQ6ZS11 566 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 FANCBQ8NB91 859 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 GLIS3Q8NEA6 775 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 ZNF608Q9ULD9 1512 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 OPHN1O60890 802 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MECOMQ03112 1051 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 IRF2BP1Q8IU81 584 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MBD4O95243 580 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 ACADSP16219 412 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 CACNB1Q02641 598 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 UBL4BQ8N7F7 174 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 USP33Q8TEY7 942 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TTF1Q15361 905 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 CCDC25Q86WR0 208 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 RMDN1Q96DB5 314 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MRPL46Q9H2W6 279 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 CTNND2Q9UQB3 1225 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SYNJ1O43426 1573 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 UBAP1LF5GYI3 381 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 POU5F1Q01860 360 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 PLCB4Q15147 1175 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SRRM1Q8IYB3 904 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 LRRC15Q8TF66 581 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 GLT8D2Q9H1C3 349 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 USP17L3A6NCW0 530 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 USP17L4A6NCW7 530 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 PIK3AP1Q6ZUJ8 805 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 USP17L1Q7RTZ2 530 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 FAM81BQ96LP2 452 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TXNDC16Q9P2K2 825 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SLC12A7Q9Y666 1083 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 NAPGQ99747 312 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 AP1M1Q9BXS5 423 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 GOLPH3Q9H4A6 298 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 USP17L8P0C7I0 530 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 CASP14P31944 242 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TTBK2Q6IQ55 1244 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 NELFCDQ8IXH7 590 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MCUR1Q96AQ8 359 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 RRP15Q9Y3B9 282 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 MYBL2P10244 700 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 EIF4A3P38919 411 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 TBX2Q13207 712 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 TTC27Q6P3X3 843 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 ZNF790Q6PG37 636 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SDR42E1Q8WUS8 393 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 PRPF31Q8WWY3 499 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 PIGBQ92521 554 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 COMMD10Q9Y6G5 202 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 IFT88Q13099 833 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 KIF6Q6ZMV9 814 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 ST13P5Q8NFI4 369 aaPredicted RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 RUBCNQ92622 972 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 C16orf96A6NNT2 1141 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 TTI1O43156 1089 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SORBS3O60504 671 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 FLT3P36888 993 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 DNM2P50570 870 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 NUDT12Q9BQG2 462 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MMEP08473 750 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 NT5C2P49902 561 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 MTA1Q13330 715 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 NONOQ15233 471 aaKnown RBP eCLIP3.36□□□□□ -1.87
NEB-220ENST00000618972 TSGA10IPQ3SY00 556 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 POP5Q969H6 163 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 PBKQ96KB5 322 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 DNAJC17Q9NVM6 304 aaKnown RBP3.36□□□□□ -1.87
NEB-220ENST00000618972 UBE4BO95155 1302 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 PRCPP42785 496 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SLC35G1Q2M3R5 365 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 SESTD1Q86VW0 696 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 IQCA1Q86XH1 822 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 USP20Q9Y2K6 914 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 PTPRCP08575 1304 aa3.36□□□□□ -1.87
NEB-220ENST00000618972 CASP7P55210 303 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 B4DLN1 442 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 FTCDO95954 541 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 TRIP13Q15645 432 aaPredicted RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 PPP1R2P3Q6NXS1 205 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 RSRC2Q7L4I2 434 aaKnown RBP3.35□□□□□ -1.87
NEB-220ENST00000618972 NOX5Q96PH1 765 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 RGL1Q9NZL6 768 aa3.35□□□□□ -1.87
NEB-220ENST00000618972 DMGDHQ9UI17 866 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms