RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 TPCN1Q9ULQ1 816 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 DUSP11O75319 330 aaKnown RBP17.96■□□□□ 0.47
RPP40-207ENST00000618533 FARP2O94887 1054 aaPredicted RBP17.96■□□□□ 0.47
RPP40-207ENST00000618533 NAPAP54920 295 aa17.96■□□□□ 0.47
RPP40-207ENST00000618533 RABEP1Q15276 862 aa17.96■□□□□ 0.47
RPP40-207ENST00000618533 STXBP2Q15833 593 aa17.96■□□□□ 0.47
RPP40-207ENST00000618533 CCDC144BQ3MJ40 725 aa17.96■□□□□ 0.47
RPP40-207ENST00000618533 WWC2Q6AWC2 1192 aa17.96■□□□□ 0.47
RPP40-207ENST00000618533 IQSEC1Q6DN90 963 aa17.96■□□□□ 0.47
RPP40-207ENST00000618533 FAM177A1Q8N128 213 aaPredicted RBP17.96■□□□□ 0.47
RPP40-207ENST00000618533 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.47
RPP40-207ENST00000618533 KIF2CQ99661 725 aa17.96■□□□□ 0.47
RPP40-207ENST00000618533 FRMPD4Q14CM0 1322 aa17.96■□□□□ 0.46
RPP40-207ENST00000618533 BRCA2P51587 3418 aa17.95■□□□□ 0.46
RPP40-207ENST00000618533 hCG_1642624A0A1W2PR95 340 aa17.95■□□□□ 0.46
RPP40-207ENST00000618533 ESYT2A0FGR8 921 aa17.95■□□□□ 0.46
RPP40-207ENST00000618533 DNM1LO00429 736 aa17.95■□□□□ 0.46
RPP40-207ENST00000618533 HOXA13P31271 388 aaPredicted RBP17.95■□□□□ 0.46
RPP40-207ENST00000618533 MLLT1Q03111 559 aaPredicted RBP17.95■□□□□ 0.46
RPP40-207ENST00000618533 UBE2Q1Q7Z7E8 422 aa17.95■□□□□ 0.46
RPP40-207ENST00000618533 GPKOWQ92917 476 aaPredicted RBP eCLIP17.95■□□□□ 0.46
RPP40-207ENST00000618533 BACH2Q9BYV9 841 aa17.95■□□□□ 0.46
RPP40-207ENST00000618533 NCOA5Q9HCD5 579 aaKnown RBP17.95■□□□□ 0.46
RPP40-207ENST00000618533 Q9Y3F1 56 aa17.95■□□□□ 0.46
RPP40-207ENST00000618533 RBM47A0AV96 593 aaKnown RBP17.94■□□□□ 0.46
RPP40-207ENST00000618533 STXBP3O00186 592 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 MEIS2O14770 477 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 EIF3JO75822 258 aaKnown RBP17.94■□□□□ 0.46
RPP40-207ENST00000618533 STAM2O75886 525 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 DEXIO95424 95 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 NR3C2P08235 984 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 TNFAIP2Q03169 654 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 SSRP1Q08945 709 aaKnown RBP17.94■□□□□ 0.46
RPP40-207ENST00000618533 STK3Q13188 491 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 MCTP2Q6DN12 878 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 TAPT1Q6NXT6 567 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 XRRA1Q6P2D8 792 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 NECAB2Q7Z6G3 386 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 FBXO16Q8IX29 292 aaPredicted RBP17.94■□□□□ 0.46
RPP40-207ENST00000618533 CCDC148Q8NFR7 591 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 SCFD2Q8WU76 684 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 PHKBQ93100 1093 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 TBC1D32Q96NH3 1257 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 PDCD2LQ9BRP1 358 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 SLC26A6Q9BXS9 759 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 SPC25Q9HBM1 224 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 RIC8AQ9NPQ8 531 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 XPNPEP3Q9NQH7 507 aa17.94■□□□□ 0.46
RPP40-207ENST00000618533 NKRFO15226 690 aaKnown RBP eCLIP17.93■□□□□ 0.46
RPP40-207ENST00000618533 FOSP01100 380 aaPredicted RBP17.93■□□□□ 0.46
RPP40-207ENST00000618533 EIF2AK2P19525 551 aaKnown RBP17.93■□□□□ 0.46
RPP40-207ENST00000618533 ADCY7P51828 1080 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 NKX3-2P78367 333 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 SCRN1Q12765 414 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 PGM5Q15124 567 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 PKN1Q16512 942 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 RNF180Q86T96 592 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 FCHSD1Q86WN1 690 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 LARP6Q9BRS8 491 aaKnown RBP17.93■□□□□ 0.46
RPP40-207ENST00000618533 EHMT1Q9H9B1 1298 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 SH3GLB2Q9NR46 395 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 LIMCH1Q9UPQ0 1083 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 STK36Q9NRP7 1315 aa17.93■□□□□ 0.46
RPP40-207ENST00000618533 SPDYE3A6NKU9 549 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 KBTBD13C9JR72 458 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 ST18O60284 1047 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 CST5P28325 142 aaPredicted RBP17.92■□□□□ 0.46
RPP40-207ENST00000618533 GNA11P29992 359 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 CCND2P30279 289 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 ADCYAP1R1P41586 468 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 ME3Q16798 604 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 DUSP28Q4G0W2 176 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 KCNV1Q6PIU1 500 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 USP17L6PQ6QN14 398 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 EEPD1Q7L9B9 569 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 VSIG10LQ86VR7 867 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 GTF3C6Q969F1 213 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 ZSCAN31Q96LW9 406 aaPredicted RBP17.92■□□□□ 0.46
RPP40-207ENST00000618533 TSEN34Q9BSV6 310 aaKnown RBP17.92■□□□□ 0.46
RPP40-207ENST00000618533 HTATIP2Q9BUP3 242 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 ZMYND12Q9H0C1 365 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 UPF3AQ9H1J1 476 aaKnown RBP17.92■□□□□ 0.46
RPP40-207ENST00000618533 C6orf50Q9HD87 102 aa17.92■□□□□ 0.46
RPP40-207ENST00000618533 SMCO2A6NFE2 343 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 ADAMTS4O75173 837 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
RPP40-207ENST00000618533 GJA9P57773 515 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 AP3B2Q13367 1082 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 TTLL4Q14679 1199 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 LRRC41Q15345 812 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 ANO1Q5XXA6 986 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 TYW1BQ6NUM6 668 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 WDR11Q9BZH6 1224 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 C11orf49Q9H6J7 331 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 SH2B1Q9NRF2 756 aaPredicted RBP17.91■□□□□ 0.46
RPP40-207ENST00000618533 GNEQ9Y223 722 aaKnown RBP17.91■□□□□ 0.46
RPP40-207ENST00000618533 SYNRGQ9UMZ2 1314 aa17.91■□□□□ 0.46
RPP40-207ENST00000618533 COL6A1P12109 1028 aa17.9■□□□□ 0.46
RPP40-207ENST00000618533 GNPTABQ3T906 1256 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms