RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 C1orf53Q5VUE5 145 aa28.78■■■□□ 2.2
PMS1-220ENST00000618056 SLC39A5Q6ZMH5 540 aa28.78■■■□□ 2.2
PMS1-220ENST00000618056 NOL8Q76FK4 1167 aaKnown RBP28.78■■■□□ 2.2
PMS1-220ENST00000618056 TLK2Q86UE8 772 aa28.78■■■□□ 2.2
PMS1-220ENST00000618056 PCSK9Q8NBP7 692 aaKnown RBP28.78■■■□□ 2.2
PMS1-220ENST00000618056 TRIOBPQ9H2D6 2365 aa28.78■■■□□ 2.2
PMS1-220ENST00000618056 A0A1W2PQ45 241 aaPredicted RBP28.77■■■□□ 2.2
PMS1-220ENST00000618056 A0A1W2PQY0 241 aa28.77■■■□□ 2.2
PMS1-220ENST00000618056 ACLYP53396 1101 aa28.77■■■□□ 2.2
PMS1-220ENST00000618056 KCNA10Q16322 511 aa28.77■■■□□ 2.2
PMS1-220ENST00000618056 RTN1Q16799 776 aa28.77■■■□□ 2.2
PMS1-220ENST00000618056 FERMT2Q96AC1 680 aa28.77■■■□□ 2.2
PMS1-220ENST00000618056 PXMP2Q9NR77 195 aa28.77■■■□□ 2.2
PMS1-220ENST00000618056 GCOM1H8Y6P7 765 aaPredicted RBP28.76■■■□□ 2.19
PMS1-220ENST00000618056 POLR2MP0CAP2 368 aa28.76■■■□□ 2.19
PMS1-220ENST00000618056 PPP2R5BQ15173 497 aa28.76■■■□□ 2.19
PMS1-220ENST00000618056 GNASQ5JWF2 1037 aa28.76■■■□□ 2.19
PMS1-220ENST00000618056 ARHGEF16Q5VV41 709 aa28.76■■■□□ 2.19
PMS1-220ENST00000618056 SCFD2Q8WU76 684 aa28.76■■■□□ 2.19
PMS1-220ENST00000618056 WDR11Q9BZH6 1224 aa28.76■■■□□ 2.19
PMS1-220ENST00000618056 ZSWIM6Q9HCJ5 1215 aa28.76■■■□□ 2.19
PMS1-220ENST00000618056 IRX5P78411 483 aaPredicted RBP28.75■■■□□ 2.19
PMS1-220ENST00000618056 BRF1Q92994 677 aa28.75■■■□□ 2.19
PMS1-220ENST00000618056 TM6SF1Q9BZW5 370 aa28.75■■■□□ 2.19
PMS1-220ENST00000618056 GOLGA8AA7E2F4 631 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 GOLGA8BA8MQT2 603 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 HOXA13P31271 388 aaPredicted RBP28.74■■■□□ 2.19
PMS1-220ENST00000618056 RTP1P59025 263 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 FUT2Q10981 343 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 STXBP2Q15833 593 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 RUFY3Q7L099 469 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 CCDC82Q8N4S0 544 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 AP5M1Q9H0R1 490 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 CNTNAP5Q8WYK1 1306 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 NID2Q14112 1375 aa28.74■■■□□ 2.19
PMS1-220ENST00000618056 DYNC1LI2O43237 492 aaPredicted RBP28.73■■■□□ 2.19
PMS1-220ENST00000618056 ASGR1P07306 291 aa28.73■■■□□ 2.19
PMS1-220ENST00000618056 NR3C2P08235 984 aa28.73■■■□□ 2.19
PMS1-220ENST00000618056 EIF2AK2P19525 551 aaKnown RBP28.73■■■□□ 2.19
PMS1-220ENST00000618056 APOBRQ0VD83 1088 aa28.73■■■□□ 2.19
PMS1-220ENST00000618056 TMEM63BQ5T3F8 832 aa28.73■■■□□ 2.19
PMS1-220ENST00000618056 FAM217BQ9NTX9 383 aaPredicted RBP28.73■■■□□ 2.19
PMS1-220ENST00000618056 NKRFO15226 690 aaKnown RBP eCLIP28.72■■■□□ 2.19
PMS1-220ENST00000618056 EIF5BO60841 1220 aaKnown RBP28.72■■■□□ 2.19
PMS1-220ENST00000618056 FSCN1Q16658 493 aaKnown RBP28.72■■■□□ 2.19
PMS1-220ENST00000618056 PDCD2LQ9BRP1 358 aa28.72■■■□□ 2.19
PMS1-220ENST00000618056 MYH7BA7E2Y1 1941 aa28.72■■■□□ 2.19
PMS1-220ENST00000618056 PIK3CDO00329 1044 aa28.72■■■□□ 2.19
PMS1-220ENST00000618056 EIF3JO75822 258 aaKnown RBP28.72■■■□□ 2.19
PMS1-220ENST00000618056 EVCP57679 992 aa28.72■■■□□ 2.19
PMS1-220ENST00000618056 GLT1D1Q96MS3 346 aa28.72■■■□□ 2.19
PMS1-220ENST00000618056 STARD7Q9NQZ5 370 aa28.72■■■□□ 2.19
PMS1-220ENST00000618056 ZMYND8Q9ULU4 1186 aaPredicted RBP28.72■■■□□ 2.19
PMS1-220ENST00000618056 CYP46A1Q9Y6A2 500 aa28.72■■■□□ 2.19
PMS1-220ENST00000618056 ELP1O95163 1332 aa28.71■■■□□ 2.19
PMS1-220ENST00000618056 PTGS1P23219 599 aa28.71■■■□□ 2.19
PMS1-220ENST00000618056 CDC27P30260 824 aa28.71■■■□□ 2.19
PMS1-220ENST00000618056 METAP2P50579 478 aaKnown RBP eCLIP28.71■■■□□ 2.19
PMS1-220ENST00000618056 BEX3Q00994 111 aa28.71■■■□□ 2.19
PMS1-220ENST00000618056 TTLL4Q14679 1199 aa28.71■■■□□ 2.19
PMS1-220ENST00000618056 ATP11BQ9Y2G3 1177 aa28.71■■■□□ 2.19
PMS1-220ENST00000618056 FRMPD4Q14CM0 1322 aa28.71■■■□□ 2.19
PMS1-220ENST00000618056 CCDC196A0A1B0GTZ2 297 aa28.7■■■□□ 2.18
PMS1-220ENST00000618056 hCG_1642624A0A1W2PR95 340 aa28.7■■■□□ 2.18
PMS1-220ENST00000618056 PGM5Q15124 567 aa28.7■■■□□ 2.18
PMS1-220ENST00000618056 TRIM60Q495X7 471 aa28.7■■■□□ 2.18
PMS1-220ENST00000618056 CCDC62Q6P9F0 684 aa28.7■■■□□ 2.18
PMS1-220ENST00000618056 NAP1L2Q9ULW6 460 aaPredicted RBP28.7■■■□□ 2.18
PMS1-220ENST00000618056 TXNP10599 105 aaKnown RBP28.69■■■□□ 2.18
PMS1-220ENST00000618056 VSIG10LQ86VR7 867 aa28.69■■■□□ 2.18
PMS1-220ENST00000618056 FCHSD1Q86WN1 690 aa28.69■■■□□ 2.18
PMS1-220ENST00000618056 PRO3102Q9H379 93 aa28.69■■■□□ 2.18
PMS1-220ENST00000618056 COLQQ9Y215 455 aaPredicted RBP28.69■■■□□ 2.18
PMS1-220ENST00000618056 MEIS2O14770 477 aa28.68■■■□□ 2.18
PMS1-220ENST00000618056 ZEB2O60315 1214 aa28.68■■■□□ 2.18
PMS1-220ENST00000618056 CABYRO75952 493 aa28.68■■■□□ 2.18
PMS1-220ENST00000618056 ARIH2O95376 493 aa28.68■■■□□ 2.18
PMS1-220ENST00000618056 SYN1P17600 705 aa28.68■■■□□ 2.18
PMS1-220ENST00000618056 CUL5Q93034 780 aa28.68■■■□□ 2.18
PMS1-220ENST00000618056 ADD1P35611 737 aaKnown RBP28.67■■■□□ 2.18
PMS1-220ENST00000618056 ANAPC15P60006 121 aa28.67■■■□□ 2.18
PMS1-220ENST00000618056 TOB2Q14106 344 aaPredicted RBP28.67■■■□□ 2.18
PMS1-220ENST00000618056 CHRDL2Q6WN34 429 aa28.67■■■□□ 2.18
PMS1-220ENST00000618056 SEPT14Q6ZU15 432 aa28.67■■■□□ 2.18
PMS1-220ENST00000618056 SMARCC2Q8TAQ2 1214 aa28.67■■■□□ 2.18
PMS1-220ENST00000618056 PSTPIP2Q9H939 334 aa28.67■■■□□ 2.18
PMS1-220ENST00000618056 LTBP2Q14767 1821 aa28.67■■■□□ 2.18
PMS1-220ENST00000618056 CPT1AP50416 773 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 USP17L6PQ6QN14 398 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 HEATR3Q7Z4Q2 680 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 OR6J1Q8NGC5 347 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 IL31RAQ8NI17 732 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 V9GY48 417 aaPredicted RBP28.66■■■□□ 2.18
PMS1-220ENST00000618056 SCN10AQ9Y5Y9 1956 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 hCG_1984214I3L0E3 225 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 MYCLP12524 364 aaPredicted RBP28.66■■■□□ 2.18
PMS1-220ENST00000618056 CCND2P30279 289 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 TLE2Q04725 743 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 ANKRD33Q7Z3H0 272 aa28.66■■■□□ 2.18
PMS1-220ENST00000618056 TEX2Q8IWB9 1127 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms