RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 SNX29Q8TEQ0 813 aa19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 CNOT7Q9UIV1 285 aaKnown RBP19.5■□□□□ 0.71
PCDHGC3-205ENST00000617641 ATAD5Q96QE3 1844 aa19.49■□□□□ 0.71
PCDHGC3-205ENST00000617641 PAK1Q13153 545 aa19.49■□□□□ 0.71
PCDHGC3-205ENST00000617641 DNTTIP2Q5QJE6 756 aaKnown RBP19.49■□□□□ 0.71
PCDHGC3-205ENST00000617641 CCDC174Q6PII3 467 aa19.49■□□□□ 0.71
PCDHGC3-205ENST00000617641 NELFBQ8WX92 580 aa19.49■□□□□ 0.71
PCDHGC3-205ENST00000617641 TRIM9Q9C026 710 aa19.49■□□□□ 0.71
PCDHGC3-205ENST00000617641 SH2D4AQ9H788 454 aa19.49■□□□□ 0.71
PCDHGC3-205ENST00000617641 BLOC1S4Q9NUP1 217 aa19.49■□□□□ 0.71
PCDHGC3-205ENST00000617641 RWDD2AQ9UIY3 292 aa19.49■□□□□ 0.71
PCDHGC3-205ENST00000617641 CDKAL1Q5VV42 579 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 CCDC150Q8NCX0 1101 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 CHURC1Q8WUH1 139 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 CRYGNQ8WXF5 182 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 CDK5RAP3Q96JB5 506 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 R3HCC1Q9Y3T6 440 aaKnown RBP19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 ZNF541Q9H0D2 1346 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 UTRNP46939 3433 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 CYP3A7-CYP3A51PA0A087WV96 503 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 SPDYE3A6NKU9 549 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 RHOBTB3O94955 611 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 CYP3A7P24462 503 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 KRT79Q5XKE5 535 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 C7orf25Q9BPX7 421 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 ZNF341Q9BYN7 854 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 FBXO28Q9NVF7 368 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 HACL1Q9UJ83 578 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 PCDHA12Q9UN75 941 aa19.48■□□□□ 0.71
PCDHGC3-205ENST00000617641 ASIC1P78348 528 aa19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 MCM6Q14566 821 aa19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 TPD52L1Q16890 204 aaPredicted RBP19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 MBOAT7Q96N66 472 aa19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 RANBP17Q9H2T7 1088 aaKnown RBP19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 KCNMB3Q9NPA1 279 aa19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 SFPQP23246 707 aaKnown RBP eCLIP19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 MCTP2Q6DN12 878 aa19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 APTXQ7Z2E3 356 aaKnown RBP19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 ADSSL1Q8N142 457 aa19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 FEZ1Q99689 392 aa19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 STK17AQ9UEE5 414 aa19.47■□□□□ 0.71
PCDHGC3-205ENST00000617641 FOSP01100 380 aaPredicted RBP19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 SREBF1P36956 1147 aa19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 AMPD3Q01432 767 aa19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 ECM1Q16610 540 aa19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 KIF4BQ2VIQ3 1234 aa19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 SV2BQ7L1I2 683 aa19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 KCNK18Q7Z418 384 aa19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 TMEM119Q4V9L6 283 aa19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 PRR16Q569H4 304 aa19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 MOXD1Q6UVY6 613 aa19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 GIMAP8Q8ND71 665 aaPredicted RBP19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 LARP4BQ92615 738 aaKnown RBP19.46■□□□□ 0.71
PCDHGC3-205ENST00000617641 A0A1B0GTH6 734 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 PDE4DQ08499 809 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 NR1I3Q14994 352 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 FAM160B2Q86V87 743 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 FCHSD1Q86WN1 690 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 TBC1D5Q92609 795 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 RAD54LQ92698 747 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 DEFB129Q9H1M3 183 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 EXOC1Q9NV70 894 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 FEM1BQ9UK73 627 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 TRIM49BA6NDI0 452 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 MYMKA6NI61 221 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 PIK3CDO00329 1044 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 PLA2G6O60733 806 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 GOLGA8FQ08AF8 430 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 GOLGA8DPQ0D2H9 430 aa19.45■□□□□ 0.7
PCDHGC3-205ENST00000617641 FAM86B1E9PN63 330 aa19.44■□□□□ 0.7
PCDHGC3-205ENST00000617641 CFBP00751 764 aa19.44■□□□□ 0.7
PCDHGC3-205ENST00000617641 FAM86B2P0C5J1 330 aa19.44■□□□□ 0.7
PCDHGC3-205ENST00000617641 ETNPPLQ8TBG4 499 aa19.44■□□□□ 0.7
PCDHGC3-205ENST00000617641 CCDC47Q96A33 483 aaKnown RBP19.44■□□□□ 0.7
PCDHGC3-205ENST00000617641 LENG9Q96B70 501 aa19.44■□□□□ 0.7
PCDHGC3-205ENST00000617641 TEX33O43247 280 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 INPP5BP32019 993 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 CCT6AP40227 531 aaKnown RBP19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 STAT3P40763 770 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 PMS1P54277 932 aaKnown RBP19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 TRAF1Q13077 416 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 SEMA3FQ13275 785 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 NBPF12Q5TAG4 269 aaPredicted RBP19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 UPF1Q92900 1129 aaKnown RBP eCLIP19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 FCER1AP12319 257 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 STK4Q13043 487 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 DGKZQ13574 1117 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 Q4G0T1 1027 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 SLFN12Q8IYM2 578 aa19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 ADD3Q9UEY8 706 aaKnown RBP19.43■□□□□ 0.7
PCDHGC3-205ENST00000617641 USP27XA6NNY8 438 aa19.42■□□□□ 0.7
PCDHGC3-205ENST00000617641 TBX2Q13207 712 aaPredicted RBP19.42■□□□□ 0.7
PCDHGC3-205ENST00000617641 STIM1Q13586 685 aa19.42■□□□□ 0.7
PCDHGC3-205ENST00000617641 SPECC1LQ69YQ0 1117 aa19.42■□□□□ 0.7
PCDHGC3-205ENST00000617641 DYMQ7RTS9 669 aa19.42■□□□□ 0.7
PCDHGC3-205ENST00000617641 HPS3Q969F9 1004 aa19.42■□□□□ 0.7
PCDHGC3-205ENST00000617641 KRT31Q15323 416 aa19.42■□□□□ 0.7
PCDHGC3-205ENST00000617641 LDHDQ86WU2 507 aa19.42■□□□□ 0.7
PCDHGC3-205ENST00000617641 CYP2W1Q8TAV3 490 aa19.42■□□□□ 0.7
PCDHGC3-205ENST00000617641 PSMA7O14818 248 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms