RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 DNAJC21Q5F1R6 531 aaKnown RBP11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 ZBTB33Q86T24 672 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 IWS1Q96ST2 819 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 MAK16Q9BXY0 300 aaKnown RBP11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 WDR11Q9BZH6 1224 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 PNMA3Q9UL41 463 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 MCTP2Q6DN12 878 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 CDC42EP5Q6NZY7 148 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 PPP1R14CQ8TAE6 165 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 RPS6KC1Q96S38 1066 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 ZC3H13Q5T200 1668 aaKnown RBP11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 BCRP11274 1271 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 POLR2FP61218 127 aaKnown RBP11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 TFAMQ00059 246 aaKnown RBP11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 APOBEC3FQ8IUX4 373 aaKnown RBP11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 TAF6LQ9Y6J9 622 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 ABCB11O95342 1321 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 CNTNAP4Q9C0A0 1308 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 DDIT3P35638 169 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 STAT1P42224 750 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 CUL4AQ13619 759 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 NLRP7Q8WX94 980 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 GOLGA1Q92805 767 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 OSBPL5Q9H0X9 879 aaPredicted RBP11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 LY9Q9HBG7 655 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 PNMA2Q9UL42 364 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 GOLGA8IPA6NC78 632 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 GOLGA8JA6NMD2 632 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 LRRN2O75325 713 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 MYZAPP0CAP1 466 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 GOLGA8FQ08AF8 430 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 GOLGA8DPQ0D2H9 430 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 MB21D2Q8IYB1 491 aaPredicted RBP11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 TRERF1Q96PN7 1200 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 KMT5AQ9NQR1 393 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 CWC15Q9P013 229 aaKnown RBP11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 NXF1Q9UBU9 619 aaKnown RBP11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 PCDHA6Q9UN73 950 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 PCDHA8Q9Y5H6 950 aa11.17□□□□□ -0.62
SMARCA1-205ENST00000617310 FLT1P17948 1338 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 A0A1W2PRG0 241 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 VWA3BQ502W6 1294 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 SFMBT2Q5VUG0 894 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 SCYL2Q6P3W7 929 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 DEFB129Q9H1M3 183 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 HOXC10Q9NYD6 342 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 PALM3A6NDB9 673 aaPredicted RBP11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 CEP104O60308 925 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 MCM3P25205 808 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 CCND2P30279 289 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 STAT3P40763 770 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 PRPF38AQ8NAV1 312 aaKnown RBP11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 MED10Q9BTT4 135 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 PLA2G12BQ9BX93 195 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 RPAP3Q9H6T3 665 aaPredicted RBP11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 C1orf112Q9NSG2 853 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 PP2D1A8MPX8 630 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 GCFC2P16383 781 aaKnown RBP11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 ARPP19P56211 112 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 NFIAQ12857 509 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 ARHGEF6Q15052 776 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 LIN9Q5TKA1 542 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 BSPRYQ5W0U4 402 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 SPECC1LQ69YQ0 1117 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 RCSD1Q6JBY9 416 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 TAB3Q8N5C8 712 aaPredicted RBP11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 NEDD1Q8NHV4 660 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 POLLQ9UGP5 575 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
SMARCA1-205ENST00000617310 RFX1P22670 979 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 HUNKP57058 714 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 MTMR1Q13613 665 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 SEL1L2Q5TEA6 688 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 CYP26C1Q6V0L0 522 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 THNSL1Q8IYQ7 743 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 CDHR1Q96JP9 859 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 POLR3EQ9NVU0 708 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 PAXBP1Q9Y5B6 917 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 MED14O60244 1454 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 PABPN1LA6NDY0 278 aaKnown RBP11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 TNNC2P02585 160 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 GUCY1A2P33402 732 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 ARHGAP4P98171 946 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 RNASELQ05823 741 aaKnown RBP11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 RSBN1LQ6PCB5 846 aaPredicted RBP11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 PPP1R21Q6ZMI0 780 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 CCDC91Q7Z6B0 441 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 BANK1Q8NDB2 785 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 NACC1Q96RE7 527 aa11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 GPBP1L1Q9HC44 474 aaPredicted RBP11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 ZNF70Q9UC06 446 aaPredicted RBP11.15□□□□□ -0.62
SMARCA1-205ENST00000617310 ATP2C2O75185 946 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms