RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ZSWIM8A7E2V4 1837 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 M0R2N6 131 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 XRCC5P13010 732 aaKnown RBP17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 EIF2AK2P19525 551 aaKnown RBP17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 SYT1P21579 422 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 ALDH5A1P51649 535 aaPredicted RBP17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 UBXN2AP68543 259 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 NR5A1Q13285 461 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 AP3B2Q13367 1082 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 IRF5Q13568 498 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 CTU1Q7Z7A3 348 aaKnown RBP17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 MAML3Q96JK9 1138 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 ANO3Q9BYT9 981 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 PXMP2Q9NR77 195 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 ASTN1O14525 1302 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 DOCK3Q8IZD9 2030 aa17.87■□□□□ 0.45
PCDHGC3-204ENST00000617222 MCTP2Q6DN12 878 aa17.86■□□□□ 0.45
PCDHGC3-204ENST00000617222 MCTP1Q6DN14 999 aa17.86■□□□□ 0.45
PCDHGC3-204ENST00000617222 ZNF467Q7Z7K2 595 aaPredicted RBP17.86■□□□□ 0.45
PCDHGC3-204ENST00000617222 PDCD2LQ9BRP1 358 aa17.86■□□□□ 0.45
PCDHGC3-204ENST00000617222 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
PCDHGC3-204ENST00000617222 FLRT1Q9NZU1 646 aa17.86■□□□□ 0.45
PCDHGC3-204ENST00000617222 PTPN22Q9Y2R2 807 aa17.86■□□□□ 0.45
PCDHGC3-204ENST00000617222 PTCH2Q9Y6C5 1203 aa17.86■□□□□ 0.45
PCDHGC3-204ENST00000617222 CASP8AP2Q9UKL3 1982 aa17.86■□□□□ 0.45
PCDHGC3-204ENST00000617222 VPS37CA5D8V6 355 aaPredicted RBP17.85■□□□□ 0.45
PCDHGC3-204ENST00000617222 ASB14A6NK59 587 aa17.85■□□□□ 0.45
PCDHGC3-204ENST00000617222 ADCY3O60266 1144 aa17.85■□□□□ 0.45
PCDHGC3-204ENST00000617222 NR3C2P08235 984 aa17.85■□□□□ 0.45
PCDHGC3-204ENST00000617222 GNL2Q13823 731 aaKnown RBP17.85■□□□□ 0.45
PCDHGC3-204ENST00000617222 OLFML2BQ68BL8 750 aa17.85■□□□□ 0.45
PCDHGC3-204ENST00000617222 KRT25Q7Z3Z0 450 aa17.85■□□□□ 0.45
PCDHGC3-204ENST00000617222 TINF2Q9BSI4 451 aa17.85■□□□□ 0.45
PCDHGC3-204ENST00000617222 EHMT1Q9H9B1 1298 aa17.85■□□□□ 0.45
PCDHGC3-204ENST00000617222 RPTORQ8N122 1335 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 CCDC194A0A1B0GVG4 234 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 B4DLN1 442 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 KIF28PB7ZC32 967 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 STX6O43752 255 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 MYCLP12524 364 aaPredicted RBP17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 ELNP15502 786 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 PGM5Q15124 567 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 EARS2Q5JPH6 523 aaKnown RBP17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 MAMDC4Q6UXC1 1216 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 PIK3AP1Q6ZUJ8 805 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 ARMCX2Q7L311 632 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 TRMT44Q8IYL2 757 aaKnown RBP17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 IL31RAQ8NI17 732 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 TRIB2Q92519 343 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 TNFRSF25Q93038 417 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 ZFP91Q96JP5 570 aaPredicted RBP17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 IWS1Q96ST2 819 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 MPHOSPH6Q99547 160 aaKnown RBP17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 FOXP1Q9H334 677 aaPredicted RBP17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 MGAMO43451 1857 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 PLXNB2O15031 1838 aa17.84■□□□□ 0.45
PCDHGC3-204ENST00000617222 SNAI1O95863 264 aaPredicted RBP17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 EDNRBP24530 442 aa17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 CYP2C19P33261 490 aa17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 SREBF1P36956 1147 aa17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 PDE4DQ08499 809 aa17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 NONOQ15233 471 aaKnown RBP eCLIP17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 MFSD14CQ5VZR4 134 aa17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 VSIG10LQ86VR7 867 aa17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 MSL3Q8N5Y2 521 aaKnown RBP17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 MORC4Q8TE76 937 aa17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 TBCKQ8TEA7 893 aa17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 MTMR6Q9Y217 621 aa17.83■□□□□ 0.44
PCDHGC3-204ENST00000617222 ZNFX1Q9P2E3 1918 aaKnown RBP17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 FRMPD4Q14CM0 1322 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 LOC102724159A0A0B4J2E5 919 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 FAM205CA6NFA0 338 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 IGHA2P01877 340 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 U2AF2P26368 475 aaKnown RBP eCLIP17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 CCND2P30279 289 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 ARHGAP4P98171 946 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 PWP2Q15269 919 aaKnown RBP17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 STXBP2Q15833 593 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 INF2Q27J81 1249 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 PRAMEF19Q5SWL8 479 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 EEPD1Q7L9B9 569 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 SLAIN1Q8ND83 568 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 PXYLP1Q8TE99 480 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 RTEL1Q9NZ71 1219 aa17.82■□□□□ 0.44
PCDHGC3-204ENST00000617222 SYNGAP1Q96PV0 1343 aa17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 GRK4P32298 578 aa17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 MRPS9P82933 396 aaKnown RBP17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 TRIM32Q13049 653 aa17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 PKN2Q16513 984 aaKnown RBP17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 FOXD4L5Q5VV16 416 aaPredicted RBP17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 PCNX4Q63HM2 1172 aa17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 FERMT3Q86UX7 667 aa17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 NOSTRINQ8IVI9 506 aa17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 FOXD4L4Q8WXT5 416 aaPredicted RBP17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 ZNF236Q9UL36 1845 aa17.81■□□□□ 0.44
PCDHGC3-204ENST00000617222 EDIL3O43854 480 aa17.8■□□□□ 0.44
PCDHGC3-204ENST00000617222 HMGCRP04035 888 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms